RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 WDR55Q9H6Y2 383 aaPredicted RBP17.33■□□□□ 0.36
CIRBP-245ENST00000621399 SLC35C2Q9NQQ7 365 aa17.33■□□□□ 0.36
CIRBP-245ENST00000621399 GIMAP4Q9NUV9 329 aa17.33■□□□□ 0.36
CIRBP-245ENST00000621399 NOP53Q9NZM5 478 aaKnown RBP17.33■□□□□ 0.36
CIRBP-245ENST00000621399 PPIEQ9UNP9 301 aaKnown RBP17.33■□□□□ 0.36
CIRBP-245ENST00000621399 EXO1Q9UQ84 846 aaKnown RBP17.33■□□□□ 0.36
CIRBP-245ENST00000621399 TP53TG5Q9Y2B4 290 aa17.33■□□□□ 0.36
CIRBP-245ENST00000621399 GOLGA8QA0A0J9YX86 632 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 TRBV11-1A0A0K0K1C0 115 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 GOLGA8OA6NCC3 632 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 GOLGA8NF8WBI6 632 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 K7EM74 188 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 SDHDO14521 159 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 DDAH2O95865 285 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 NT5EP21589 574 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 EPHA3P29320 983 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 GALNSP34059 522 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 ERVK-8P63133 956 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 ZNF267Q14586 743 aaPredicted RBP17.32■□□□□ 0.36
CIRBP-245ENST00000621399 LACTB2Q53H82 288 aaPredicted RBP17.32■□□□□ 0.36
CIRBP-245ENST00000621399 CRB2Q5IJ48 1285 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 ASB18Q6ZVZ8 466 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 LARP4Q71RC2 724 aaKnown RBP eCLIP17.32■□□□□ 0.36
CIRBP-245ENST00000621399 LRRC34Q8IZ02 419 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 LRRC25Q8N386 305 aaPredicted RBP17.32■□□□□ 0.36
CIRBP-245ENST00000621399 APCDD1LQ8NCL9 501 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 SLC2A12Q8TD20 617 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 CNRIP1Q96F85 164 aaPredicted RBP17.32■□□□□ 0.36
CIRBP-245ENST00000621399 SENP5Q96HI0 755 aaPredicted RBP17.32■□□□□ 0.36
CIRBP-245ENST00000621399 ZNF681Q96N22 645 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 SMAD5Q99717 465 aaKnown RBP17.32■□□□□ 0.36
CIRBP-245ENST00000621399 CNPPD1Q9BV87 410 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 DEFB126Q9BYW3 111 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 SLC25A18Q9H1K4 315 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 REEP4Q9H6H4 257 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 COPS7AQ9UBW8 275 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 ENTPD4Q9Y227 616 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 ZNF451Q9Y4E5 1061 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 PCDHGB7Q9Y5F8 929 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 USH1CQ9Y6N9 552 aa17.32■□□□□ 0.36
CIRBP-245ENST00000621399 TCP11X1B4DZS4 312 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 PDGFAP04085 211 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 G6PDP11413 515 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 GPR143P51810 404 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 PTGR1Q14914 329 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 SPRED3Q2MJR0 410 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 C6orf163Q5TEZ5 329 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 B3GNTL1Q67FW5 361 aaPredicted RBP17.31■□□□□ 0.36
CIRBP-245ENST00000621399 NXNQ6DKJ4 435 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 ISLR2Q6UXK2 745 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 LINC00696Q6ZRV3 163 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 MAVSQ7Z434 540 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 GALNT12Q8IXK2 581 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 CCDC116Q8IYX3 515 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 SLC5A8Q8N695 610 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 OR1N1Q8NGS0 311 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 PPCDCQ96CD2 204 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 ART5Q96L15 291 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 BBS4Q96RK4 519 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 ASIC5Q9NY37 505 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 TAS2R7Q9NYW3 318 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 TEKT2Q9UIF3 430 aa17.31■□□□□ 0.36
CIRBP-245ENST00000621399 HRKO00198 91 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 ZNF195O14628 629 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 DIAPH2O60879 1101 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 ATP1B1P05026 303 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 MPIP34949 423 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 SOX11P35716 441 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 HPCAL1P37235 193 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 DIO3P55073 304 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 GUCY1A3Q02108 690 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 PRSS53Q2L4Q9 553 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 SLC9B1Q4ZJI4 515 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 FCRLBQ6BAA4 426 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 ANKRD26P1Q6NSI1 321 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 H3F3CQ6NXT2 135 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 HSDL2Q6YN16 418 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 R3HCC1LQ7Z5L2 792 aaKnown RBP17.3■□□□□ 0.36
CIRBP-245ENST00000621399 ZNF321PQ8N8H1 164 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 ZNF721Q8TF20 911 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 SLC39A7Q92504 469 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 TM9SF4Q92544 642 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 FBXL20Q96IG2 436 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 BBC3Q96PG8 261 aaPredicted RBP17.3■□□□□ 0.36
CIRBP-245ENST00000621399 EPS8L2Q9H6S3 715 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 CXorf21Q9HAI6 301 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 STMN3Q9NZ72 180 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 SH3BP4Q9P0V3 963 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 ERVK-19Q9WJR5 959 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 MED13Q9UHV7 2174 aa17.3■□□□□ 0.36
CIRBP-245ENST00000621399 ZFAND5O76080 213 aa17.29■□□□□ 0.36
CIRBP-245ENST00000621399 TGDSO95455 350 aa17.29■□□□□ 0.36
CIRBP-245ENST00000621399 DDX5P17844 614 aaKnown RBP17.29■□□□□ 0.36
CIRBP-245ENST00000621399 PTGER1P34995 402 aa17.29■□□□□ 0.36
CIRBP-245ENST00000621399 RPL3P39023 403 aaKnown RBP17.29■□□□□ 0.36
CIRBP-245ENST00000621399 DUSP2Q05923 314 aa17.29■□□□□ 0.36
CIRBP-245ENST00000621399 MFAP5Q13361 173 aa17.29■□□□□ 0.36
CIRBP-245ENST00000621399 ACER2Q5QJU3 275 aa17.29■□□□□ 0.36
CIRBP-245ENST00000621399 ABHD17BQ5VST6 288 aa17.29■□□□□ 0.36
CIRBP-245ENST00000621399 OGFOD2Q6N063 350 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms