RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 MANEAQ5SRI9 462 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 ARMC6Q6NXE6 501 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 RNF44Q7L0R7 432 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 IQCHQ86VS3 1027 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 ATG16L2Q8NAA4 619 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 ADAMTS16Q8TE57 1224 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 KLHL6Q8WZ60 621 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 C10orf90Q96M02 699 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 P2RX2Q9UBL9 471 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 TRPC4Q9UBN4 977 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 LYVE1Q9Y5Y7 322 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 TLR4O00206 839 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 SLC28A2O43868 658 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 FHP07954 510 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 NME1P15531 152 aaKnown RBP17.96■□□□□ 0.47
PSPC1-206ENST00000619300 ALOX12P18054 663 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 CPN2P22792 545 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 PAX7P23759 505 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 YAP1P46937 504 aaKnown RBP17.96■□□□□ 0.47
PSPC1-206ENST00000619300 RACK1P63244 317 aaKnown RBP17.96■□□□□ 0.47
PSPC1-206ENST00000619300 TNFRSF17Q02223 184 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 RUNX2Q13950 521 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 ZNF691Q5VV52 312 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 TMEM107Q6UX40 140 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 RBM44Q6ZP01 1051 aaKnown RBP17.96■□□□□ 0.47
PSPC1-206ENST00000619300 ZNF438Q7Z4V0 828 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 ZNF655Q8N720 491 aaPredicted RBP17.96■□□□□ 0.47
PSPC1-206ENST00000619300 OR56A1Q8NGH5 318 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 OR5D16Q8NGK9 328 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 KIF17Q9P2E2 1029 aa17.96■□□□□ 0.47
PSPC1-206ENST00000619300 PRAMEF27A3QJZ7 478 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 DNAJB5O75953 348 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 CDH2P19022 906 aaPredicted RBP17.95■□□□□ 0.46
PSPC1-206ENST00000619300 CD247P20963 164 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 XCR1P46094 333 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 KHKP50053 298 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 ANXA11P50995 505 aaKnown RBP17.95■□□□□ 0.46
PSPC1-206ENST00000619300 LIM2P55344 173 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 ISL1P61371 349 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 PPP1CAP62136 330 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 IL1RL1Q01638 556 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 KCNC4Q03721 635 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 SYPL1Q16563 259 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 PUS10Q3MIT2 529 aaKnown RBP17.95■□□□□ 0.46
PSPC1-206ENST00000619300 SPEM1Q8N4L4 309 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 ELP4Q96EB1 424 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 ZNF607Q96SK3 696 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 PIP5K1AQ99755 562 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 TREX2Q9BQ50 279 aaPredicted RBP17.95■□□□□ 0.46
PSPC1-206ENST00000619300 RIBC2Q9H4K1 309 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 KRT84Q9NSB2 600 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 EXD2Q9NVH0 621 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 MS4A12Q9NXJ0 267 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 DAPP1Q9UN19 280 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 FAM32AQ9Y421 112 aaKnown RBP17.95■□□□□ 0.46
PSPC1-206ENST00000619300 ENPP4Q9Y6X5 453 aa17.95■□□□□ 0.46
PSPC1-206ENST00000619300 BCKDKO14874 412 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 EMC8O43402 210 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 HMGN2P05204 90 aaKnown RBP17.94■□□□□ 0.46
PSPC1-206ENST00000619300 NR2F1P10589 423 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 FOSL2P15408 326 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 TLX1P31314 330 aaPredicted RBP17.94■□□□□ 0.46
PSPC1-206ENST00000619300 RYKP34925 604 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 HLCSP50747 726 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 RPS6KA3P51812 740 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 PRR5P85299 388 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 RPL6Q02878 288 aaKnown RBP17.94■□□□□ 0.46
PSPC1-206ENST00000619300 RBM48Q5RL73 367 aaKnown RBP17.94■□□□□ 0.46
PSPC1-206ENST00000619300 BORAQ6PGQ7 559 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 OR4C15Q8NGM1 316 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 OR9A2Q8NGT5 310 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 GIPC3Q8TF64 312 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 HDAC2Q92769 488 aaKnown RBP17.94■□□□□ 0.46
PSPC1-206ENST00000619300 SEMA6CQ9H3T2 930 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 C3orf14Q9HBI5 128 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 POMT2Q9UKY4 750 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 DNAJB6O75190 326 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 RECKO95980 971 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 IFNW1P05000 195 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 FESP07332 822 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 RHCEP18577 417 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 CDH12P55289 794 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 MAZP56270 477 aaKnown RBP17.94■□□□□ 0.46
PSPC1-206ENST00000619300 SPIBQ01892 262 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 CD47Q08722 323 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 PUM1Q14671 1186 aaKnown RBP eCLIP17.94■□□□□ 0.463e-6■□□□□ 9.9
PSPC1-206ENST00000619300 LASP1Q14847 261 aaKnown RBP17.94■□□□□ 0.46
PSPC1-206ENST00000619300 C6orf141Q5SZD1 244 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 GKN2Q86XP6 184 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 SAMD14Q8IZD0 417 aaPredicted RBP17.94■□□□□ 0.46
PSPC1-206ENST00000619300 CAMKK1Q8N5S9 505 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 CHDHQ8NE62 594 aaPredicted RBP17.94■□□□□ 0.46
PSPC1-206ENST00000619300 MIPOL1Q8TD10 442 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 APOBEC4Q8WW27 367 aaKnown RBP17.94■□□□□ 0.46
PSPC1-206ENST00000619300 TSC22D3Q99576 134 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 YIPF4Q9BSR8 244 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 RBM38Q9H0Z9 239 aaKnown RBP17.94■□□□□ 0.46
PSPC1-206ENST00000619300 PRDM9Q9NQV7 894 aa17.94■□□□□ 0.46
PSPC1-206ENST00000619300 DDX18Q9NVP1 670 aaKnown RBP17.94■□□□□ 0.46
PSPC1-206ENST00000619300 J3KTA2 159 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms