RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 TYRP14679 529 aa19.34■□□□□ 0.69
NEK3-208ENST00000618534 DDCP20711 480 aa19.34■□□□□ 0.69
NEK3-208ENST00000618534 KCNJ5P48544 419 aa19.34■□□□□ 0.69
NEK3-208ENST00000618534 DMPKQ09013 629 aa19.34■□□□□ 0.69
NEK3-208ENST00000618534 PIN1Q13526 163 aaPredicted RBP19.34■□□□□ 0.69
NEK3-208ENST00000618534 ATAT1Q5SQI0 421 aa19.34■□□□□ 0.69
NEK3-208ENST00000618534 TRMT11Q7Z4G4 463 aaKnown RBP19.34■□□□□ 0.69
NEK3-208ENST00000618534 COMTD1Q86VU5 262 aa19.34■□□□□ 0.69
NEK3-208ENST00000618534 ZNF366Q8N895 744 aa19.34■□□□□ 0.69
NEK3-208ENST00000618534 VN1R2Q8NFZ6 395 aa19.34■□□□□ 0.69
NEK3-208ENST00000618534 MSLNLQ96KJ4 702 aa19.34■□□□□ 0.69
NEK3-208ENST00000618534 TEFMQ96QE5 360 aaKnown RBP19.34■□□□□ 0.69
NEK3-208ENST00000618534 TMEM246Q9BRR3 403 aa19.34■□□□□ 0.69
NEK3-208ENST00000618534 OR2AG1Q9H205 316 aa19.34■□□□□ 0.69
NEK3-208ENST00000618534 PAQR5Q9NXK6 330 aaPredicted RBP19.34■□□□□ 0.69
NEK3-208ENST00000618534 IL36AQ9UHA7 158 aa19.34■□□□□ 0.69
NEK3-208ENST00000618534 PLAGL1Q9UM63 463 aa19.34■□□□□ 0.69
NEK3-208ENST00000618534 SNX7Q9UNH6 387 aa19.34■□□□□ 0.69
NEK3-208ENST00000618534 DIMT1Q9UNQ2 313 aaKnown RBP19.34■□□□□ 0.69
NEK3-208ENST00000618534 HMGN4O00479 90 aa19.33■□□□□ 0.69
NEK3-208ENST00000618534 LRRTM2O43300 516 aa19.33■□□□□ 0.69
NEK3-208ENST00000618534 LILRB5O75023 590 aa19.33■□□□□ 0.69
NEK3-208ENST00000618534 IL1AP01583 271 aa19.33■□□□□ 0.69
NEK3-208ENST00000618534 SYT14P1Q58G82 188 aa19.33■□□□□ 0.69
NEK3-208ENST00000618534 ZNF805Q5CZA5 627 aa19.33■□□□□ 0.69
NEK3-208ENST00000618534 C6orf120Q7Z4R8 191 aa19.33■□□□□ 0.69
NEK3-208ENST00000618534 OR5P2Q8WZ92 322 aa19.33■□□□□ 0.69
NEK3-208ENST00000618534 SLC7A6Q92536 515 aa19.33■□□□□ 0.69
NEK3-208ENST00000618534 ZNF689Q96CS4 500 aaPredicted RBP19.33■□□□□ 0.69
NEK3-208ENST00000618534 DIRAS2Q96HU8 199 aa19.33■□□□□ 0.69
NEK3-208ENST00000618534 MRGPRX3Q96LB0 322 aa19.33■□□□□ 0.69
NEK3-208ENST00000618534 ACAT2Q9BWD1 397 aa19.33■□□□□ 0.69
NEK3-208ENST00000618534 TBC1D14Q9P2M4 693 aa19.33■□□□□ 0.69
NEK3-208ENST00000618534 CARD8Q9Y2G2 431 aa19.33■□□□□ 0.69
NEK3-208ENST00000618534 CCDC182A6NF36 153 aa19.33■□□□□ 0.68
NEK3-208ENST00000618534 FABP12A6NFH5 140 aa19.33■□□□□ 0.68
NEK3-208ENST00000618534 K7ESM1 405 aa19.33■□□□□ 0.68
NEK3-208ENST00000618534 PDPK1O15530 556 aa19.33■□□□□ 0.68
NEK3-208ENST00000618534 NME6O75414 186 aaPredicted RBP19.33■□□□□ 0.68
NEK3-208ENST00000618534 RAB36O95755 333 aa19.33■□□□□ 0.68
NEK3-208ENST00000618534 TBX6O95947 436 aaPredicted RBP19.33■□□□□ 0.68
NEK3-208ENST00000618534 TRAPPC2P0DI81 140 aa19.33■□□□□ 0.68
NEK3-208ENST00000618534 TRAPPC2BP0DI82 140 aa19.33■□□□□ 0.68
NEK3-208ENST00000618534 CCR2P41597 374 aa19.33■□□□□ 0.68
NEK3-208ENST00000618534 MAPK12P53778 367 aa19.33■□□□□ 0.68
NEK3-208ENST00000618534 SPDYE7PQ495Y7 208 aa19.33■□□□□ 0.68
NEK3-208ENST00000618534 CCDC149Q6ZUS6 474 aa19.33■□□□□ 0.68
NEK3-208ENST00000618534 CD99L2Q8TCZ2 262 aa19.33■□□□□ 0.68
NEK3-208ENST00000618534 RNF170Q96K19 258 aa19.33■□□□□ 0.68
NEK3-208ENST00000618534 RANGRFQ9HD47 186 aaPredicted RBP19.33■□□□□ 0.68
NEK3-208ENST00000618534 HMX1Q9NP08 348 aaPredicted RBP19.33■□□□□ 0.68
NEK3-208ENST00000618534 SEC14L3Q9UDX4 400 aa19.33■□□□□ 0.68
NEK3-208ENST00000618534 NUFIP1Q9UHK0 495 aaKnown RBP19.33■□□□□ 0.68
NEK3-208ENST00000618534 ACAD8Q9UKU7 415 aa19.33■□□□□ 0.68
NEK3-208ENST00000618534 SPIN1Q9Y657 262 aaPredicted RBP19.33■□□□□ 0.68
NEK3-208ENST00000618534 M0R3H8 397 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 TMCC2O75069 709 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 PDE9AO76083 593 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 APOL3O95236 402 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 CPEP16870 476 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 SSTR4P31391 388 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 LSM11P83369 360 aaKnown RBP eCLIP19.32■□□□□ 0.686e-7■□□□□ 10.5
NEK3-208ENST00000618534 PRAMEF14Q5SWL7 426 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 PRAMEF13Q5VWM6 474 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 PODNL1Q6PEZ8 512 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 XKRXQ6PP77 449 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 DDX53Q86TM3 631 aaKnown RBP19.32■□□□□ 0.68
NEK3-208ENST00000618534 FAM26EQ8N5C1 309 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 CLDN22Q8N7P3 220 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 IL17RCQ8NAC3 791 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 LRR1Q96L50 414 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 FYTTD1Q96QD9 318 aaKnown RBP19.32■□□□□ 0.68
NEK3-208ENST00000618534 ZNF717Q9BY31 904 aaPredicted RBP19.32■□□□□ 0.68
NEK3-208ENST00000618534 MCOLN1Q9GZU1 580 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 LINC00597Q9H2U6 94 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 SIRT3Q9NTG7 399 aaPredicted RBP19.32■□□□□ 0.68
NEK3-208ENST00000618534 ABT1Q9ULW3 272 aaKnown RBP19.32■□□□□ 0.68
NEK3-208ENST00000618534 A4GNTQ9UNA3 340 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 A0A0B4J293 547 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 MMP20O60882 483 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 LGI1O95970 557 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 SOD1P00441 154 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 CSF2P04141 144 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 SDC2P34741 201 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 UAP1L1Q3KQV9 507 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 PDZK1Q5T2W1 519 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 UBE2J2Q8N2K1 259 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 SYT14Q8NB59 555 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 IRF7Q92985 503 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 UBE2E3Q969T4 207 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 RNF31Q96EP0 1072 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 GDF15Q99988 308 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 BEX2Q9BXY8 128 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 POLDIP3Q9BY77 421 aaKnown RBP19.32■□□□□ 0.68
NEK3-208ENST00000618534 SERHL2Q9H4I8 314 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 TMEM98Q9Y2Y6 226 aa19.32■□□□□ 0.68
NEK3-208ENST00000618534 KIAA1549LQ6ZVL6 1849 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 CENPBD1B2RD01 187 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 B4DXG7 233 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 SLC28A2O43868 658 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms