RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 ALDH9A1P49189 494 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 RAB33AQ14088 237 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 FAM187BQ17R55 369 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 HFE2Q6ZVN8 426 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 C9orf43Q8TAL5 461 aaPredicted RBP11.71□□□□□ -0.53
MATR3-227ENST00000618441 SKA2Q8WVK7 121 aaPredicted RBP11.71□□□□□ -0.53
MATR3-227ENST00000618441 RFT1Q96AA3 541 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 ZNF707Q96C28 371 aaPredicted RBP11.71□□□□□ -0.53
MATR3-227ENST00000618441 L3HYPDHQ96EM0 354 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 PEX11GQ96HA9 241 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 HRASLS5Q96KN8 279 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 SLC52A3Q9NQ40 469 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 ADARB2Q9NS39 739 aaKnown RBP11.71□□□□□ -0.53
MATR3-227ENST00000618441 OR12D3Q9UGF7 316 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 LRIT2A6NDA9 550 aa11.71□□□□□ -0.54
MATR3-227ENST00000618441 RRN3P2A6NIE6 340 aa11.71□□□□□ -0.54
MATR3-227ENST00000618441 CD8B2A6NJW9 211 aa11.71□□□□□ -0.54
MATR3-227ENST00000618441 J3KRW8 73 aa11.71□□□□□ -0.54
MATR3-227ENST00000618441 NIPSNAP2O75323 286 aa11.71□□□□□ -0.54
MATR3-227ENST00000618441 FGF4P08620 206 aa11.71□□□□□ -0.54
MATR3-227ENST00000618441 CD8BP10966 210 aa11.71□□□□□ -0.54
MATR3-227ENST00000618441 SLC25A25Q6KCM7 469 aa11.71□□□□□ -0.54
MATR3-227ENST00000618441 CASP12Q6UXS9 341 aa11.71□□□□□ -0.54
MATR3-227ENST00000618441 OR2T4Q8NH00 348 aa11.71□□□□□ -0.54
MATR3-227ENST00000618441 THAP6Q8TBB0 222 aa11.71□□□□□ -0.54
MATR3-227ENST00000618441 C10orf90Q96M02 699 aa11.71□□□□□ -0.54
MATR3-227ENST00000618441 ZNF599Q96NL3 588 aa11.71□□□□□ -0.54
MATR3-227ENST00000618441 GPR21Q99679 349 aa11.71□□□□□ -0.54
MATR3-227ENST00000618441 DNTTIP1Q9H147 329 aa11.71□□□□□ -0.54
MATR3-227ENST00000618441 PXMP2Q9NR77 195 aa11.71□□□□□ -0.54
MATR3-227ENST00000618441 ZNF226Q9NYT6 803 aa11.71□□□□□ -0.54
MATR3-227ENST00000618441 TVP23BQ9NYZ1 205 aa11.71□□□□□ -0.54
MATR3-227ENST00000618441 RPS6KA6Q9UK32 745 aa11.71□□□□□ -0.54
MATR3-227ENST00000618441 TRBV23OR9-2A0A075B6M9 112 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 OR6C65A6NJZ3 312 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 LANCL1O43813 399 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 MT-ND4P03905 459 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 HOXB1P14653 301 aaPredicted RBP11.7□□□□□ -0.54
MATR3-227ENST00000618441 GSTM5P46439 218 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 GEMP55040 296 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 YBEYP58557 167 aaPredicted RBP11.7□□□□□ -0.54
MATR3-227ENST00000618441 RPS25P62851 125 aaKnown RBP11.7□□□□□ -0.54
MATR3-227ENST00000618441 C17orf67Q0P5P2 114 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 PLAG1Q6DJT9 500 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 OR4F3Q6IEY1 312 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 PGBD2Q6P3X8 592 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 RNF180Q86T96 592 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 RBFAQ8N0V3 343 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 CELF5Q8N6W0 485 aaKnown RBP11.7□□□□□ -0.54
MATR3-227ENST00000618441 TCEANCQ8N8B7 351 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 B3GALNT2Q8NCR0 500 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 THAP7Q9BT49 309 aaPredicted RBP11.7□□□□□ -0.54
MATR3-227ENST00000618441 REPIN1Q9BWE0 567 aaKnown RBP11.7□□□□□ -0.54
MATR3-227ENST00000618441 OR10A4Q9H209 315 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 RRAGCQ9HB90 399 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 COA4Q9NYJ1 87 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 ZNF69Q9UC07 566 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 GPR34Q9UPC5 381 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 MAFBQ9Y5Q3 323 aaPredicted RBP11.7□□□□□ -0.54
MATR3-227ENST00000618441 LAMB1P07942 1786 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 LAMA2P24043 3122 aaKnown RBP11.7□□□□□ -0.54
MATR3-227ENST00000618441 CSO75390 466 aaKnown RBP11.7□□□□□ -0.54
MATR3-227ENST00000618441 RP2O75695 350 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 GLUD1P00367 558 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 F12P00748 615 aaPredicted RBP11.7□□□□□ -0.54
MATR3-227ENST00000618441 CSF2RAP15509 400 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 GABRB1P18505 474 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 HK1P19367 917 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 ERVPABLB-1P60509 514 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 INSL4Q14641 139 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 CHRNA6Q15825 494 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 GPR33Q49SQ1 333 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 ARMC6Q6NXE6 501 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 ATCAYQ86WG3 371 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 CFAP206Q8IYR0 622 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 TOMM5Q8N4H5 51 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 SAMD12Q8N8I0 201 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 OR6S1Q8NH40 331 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 TM9SF4Q92544 642 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 S100PBPQ96BU1 408 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 COPS8Q99627 209 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 SEMA3GQ9NS98 782 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 CDH10Q9Y6N8 788 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 FZD6O60353 706 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 CBSLP0DN79 551 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 PTBP1P26599 531 aaKnown RBP eCLIP11.7□□□□□ -0.548e-8■■■■□ 20.7
MATR3-227ENST00000618441 CBSP35520 551 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 MATKP42679 507 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 CLCN3P51790 818 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 PPIGQ13427 754 aaKnown RBP eCLIP11.7□□□□□ -0.549e-7■■□□□ 13.7
MATR3-227ENST00000618441 SSX2Q16385 188 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 TMEM185AQ8NFB2 350 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 SLC25A46Q96AG3 418 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 MRPL48Q96GC5 212 aaKnown RBP11.7□□□□□ -0.54
MATR3-227ENST00000618441 H2AFJQ9BTM1 129 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 PAPOLGQ9BWT3 736 aaKnown RBP11.7□□□□□ -0.54
MATR3-227ENST00000618441 PRMT7Q9NVM4 692 aaPredicted RBP11.7□□□□□ -0.54
MATR3-227ENST00000618441 FLVCR2Q9UPI3 526 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 KIAA1551Q9HCM1 1747 aa11.7□□□□□ -0.54
MATR3-227ENST00000618441 MFSD2BA6NFX1 497 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms