RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 ZNF556Q9HAH1 456 aa14.86□□□□□ -0.03
NR1H3-235ENST00000616973 ERVK-18Q9QC07 812 aa14.86□□□□□ -0.03
NR1H3-235ENST00000616973 KLHL20Q9Y2M5 609 aa14.86□□□□□ -0.03
NR1H3-235ENST00000616973 PRAMEF27A3QJZ7 478 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 ZNF99A8MXY4 864 aaPredicted RBP14.85□□□□□ -0.03
NR1H3-235ENST00000616973 PCDH17O14917 1159 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 PCDHGA12O60330 932 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 CDK4P11802 303 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 PPP2R1BP30154 601 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 BMP8BP34820 402 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 CCR5P51681 352 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 LIM2P55344 173 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 RAB8AP61006 207 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 C18orf63Q68DL7 685 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 GPR153Q6NV75 609 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 Q6ZSR6 202 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 SLC44A2Q8IWA5 706 aaPredicted RBP14.85□□□□□ -0.03
NR1H3-235ENST00000616973 SVOPQ8N4V2 548 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 BBS10Q8TAM1 723 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 PHF10Q8WUB8 498 aaKnown RBP14.85□□□□□ -0.03
NR1H3-235ENST00000616973 FAR1Q8WVX9 515 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 APH1BQ8WW43 257 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 THAP11Q96EK4 314 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 ALPK1Q96QP1 1244 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 NIPSNAP1Q9BPW8 284 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 TREX2Q9BQ50 279 aaPredicted RBP14.85□□□□□ -0.03
NR1H3-235ENST00000616973 RSPO3Q9BXY4 272 aaPredicted RBP14.85□□□□□ -0.03
NR1H3-235ENST00000616973 ROGDIQ9GZN7 287 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 CCDC90BQ9GZT6 254 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 PLCXD1Q9NUJ7 323 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 GIMAP4Q9NUV9 329 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 FBXW2Q9UKT8 454 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 RNF6Q9Y252 685 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 PCDHGA10Q9Y5H3 936 aa14.85□□□□□ -0.03
NR1H3-235ENST00000616973 GLOD5A6NK44 160 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 WASHC1A8K0Z3 465 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 PRAMEF26H0Y7S4 382 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 AXIN1O15169 862 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 FAM20BO75063 409 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 ERAL1O75616 437 aaKnown RBP14.84□□□□□ -0.03
NR1H3-235ENST00000616973 FHP07954 510 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 SMIM10L1P0DMW3 83 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 CCNA2P20248 432 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 ACVR2AP27037 513 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 CD6P30203 668 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 MPIP34949 423 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 RABIFP47224 123 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 MVKQ03426 396 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 RELAQ04206 551 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 GNA13Q14344 377 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 SYPL1Q16563 259 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 PRAMEF8Q5VWM4 474 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 PRAMEF7Q5VXH5 474 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 FBXO42Q6P3S6 717 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 KRT73Q86Y46 540 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 DEPDC4Q8N2C3 294 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 GPBAR1Q8TDU6 330 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 FAM3CQ92520 227 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 FKBP10Q96AY3 582 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 SMIM10Q96HG1 83 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 SIGLEC11Q96RL6 698 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 BCL7BQ9BQE9 202 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 AASSQ9UDR5 926 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 ACAD8Q9UKU7 415 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 KLK4Q9Y5K2 254 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 SCN3AQ9NY46 2000 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 FAM221BA6H8Z2 402 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 FFAR1O14842 300 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 RGS10O43665 173 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 OXSR1O95747 527 aaPredicted RBP14.84□□□□□ -0.03
NR1H3-235ENST00000616973 TNFP01375 233 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 NR2F1P10589 423 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 UGT2B7P16662 529 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 KRT20P35900 424 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 CRISP3P54108 245 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 GP2P55259 537 aaKnown RBP14.84□□□□□ -0.03
NR1H3-235ENST00000616973 BTN3A2P78410 334 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 TFF2Q03403 129 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 DUSP2Q05923 314 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 ILF3Q12906 894 aaKnown RBP eCLIP14.84□□□□□ -0.03
NR1H3-235ENST00000616973 GPR19Q15760 415 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 ZNF770Q6IQ21 691 aaPredicted RBP14.84□□□□□ -0.03
NR1H3-235ENST00000616973 PRSS48Q7RTY5 328 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 ZNF540Q8NDQ6 660 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 OR9Q2Q8NGE9 314 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 RHOXF1Q8NHV9 184 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 UTP15Q8TED0 518 aaKnown RBP14.84□□□□□ -0.03
NR1H3-235ENST00000616973 XAGE5Q8WWM1 108 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 ZNF681Q96N22 645 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 OR2A5Q96R48 311 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 MAPKAP1Q9BPZ7 522 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 SPATA5L1Q9BVQ7 753 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 PRDM9Q9NQV7 894 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 TRPC4Q9UBN4 977 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 SEC14L3Q9UDX4 400 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 PSME2Q9UL46 239 aa14.84□□□□□ -0.03
NR1H3-235ENST00000616973 EMC8O43402 210 aa14.83□□□□□ -0.04
NR1H3-235ENST00000616973 SLC35G6P0C7Q6 338 aa14.83□□□□□ -0.04
NR1H3-235ENST00000616973 NR2F6P10588 404 aa14.83□□□□□ -0.04
NR1H3-235ENST00000616973 SMIM11AP58511 58 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms