RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 ALDH1A1P00352 501 aa12.96□□□□□ -0.33
PPP4R3B-205ENST00000616288 ZDHHC11BP0C7U3 371 aa12.96□□□□□ -0.33
PPP4R3B-205ENST00000616288 S100A11P31949 105 aa12.96□□□□□ -0.33
PPP4R3B-205ENST00000616288 RFX3P48380 749 aa12.96□□□□□ -0.33
PPP4R3B-205ENST00000616288 PRAMEF17Q5VTA0 474 aa12.96□□□□□ -0.33
PPP4R3B-205ENST00000616288 CLECL1Q8IZS7 167 aa12.96□□□□□ -0.33
PPP4R3B-205ENST00000616288 CELF5Q8N6W0 485 aaKnown RBP12.96□□□□□ -0.33
PPP4R3B-205ENST00000616288 RFKQ969G6 155 aa12.96□□□□□ -0.33
PPP4R3B-205ENST00000616288 PSMG2Q969U7 264 aa12.96□□□□□ -0.33
PPP4R3B-205ENST00000616288 HSPA12BQ96MM6 686 aa12.96□□□□□ -0.33
PPP4R3B-205ENST00000616288 PRPS1L1P21108 318 aa12.96□□□□□ -0.34
PPP4R3B-205ENST00000616288 G0S2P27469 103 aa12.96□□□□□ -0.34
PPP4R3B-205ENST00000616288 HOXA1P49639 335 aaPredicted RBP12.96□□□□□ -0.34
PPP4R3B-205ENST00000616288 WNT4P56705 351 aa12.96□□□□□ -0.34
PPP4R3B-205ENST00000616288 IRF3Q14653 427 aa12.96□□□□□ -0.34
PPP4R3B-205ENST00000616288 CD276Q5ZPR3 534 aa12.96□□□□□ -0.34
PPP4R3B-205ENST00000616288 POGLUT1Q8NBL1 392 aa12.96□□□□□ -0.34
PPP4R3B-205ENST00000616288 PXT1Q8NFP0 134 aa12.96□□□□□ -0.34
PPP4R3B-205ENST00000616288 OR4M1Q8NGD0 313 aa12.96□□□□□ -0.34
PPP4R3B-205ENST00000616288 CNOT9Q92600 299 aaKnown RBP12.96□□□□□ -0.34
PPP4R3B-205ENST00000616288 MED18Q9BUE0 208 aa12.96□□□□□ -0.34
PPP4R3B-205ENST00000616288 RPS10P5Q9NQ39 176 aa12.96□□□□□ -0.34
PPP4R3B-205ENST00000616288 MARK1Q9P0L2 795 aa12.96□□□□□ -0.34
PPP4R3B-205ENST00000616288 MIOXQ9UGB7 285 aa12.96□□□□□ -0.34
PPP4R3B-205ENST00000616288 ACSL6Q9UKU0 697 aa12.96□□□□□ -0.34
PPP4R3B-205ENST00000616288 CACNA1SQ13698 1873 aa12.96□□□□□ -0.34
PPP4R3B-205ENST00000616288 CNTRLQ7Z7A1 2325 aa12.96□□□□□ -0.34
PPP4R3B-205ENST00000616288 HK1P19367 917 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 PREPP48147 710 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 ILF3Q12906 894 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■□□□□ 10.8
PPP4R3B-205ENST00000616288 PEA15Q15121 130 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 TAC4Q86UU9 113 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 CLDN22Q8N7P3 220 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 TM9SF4Q92544 642 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 UPF1Q92900 1129 aaKnown RBP eCLIP12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 SLC25A46Q96AG3 418 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 PPCDCQ96CD2 204 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 OSMRQ99650 979 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 ASB4Q9Y574 426 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 UGT2B7P16662 529 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 CLINT1Q14677 625 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 METTL11BQ5VVY1 283 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 SLC30A6Q6NXT4 461 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 TAPT1Q6NXT6 567 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 PAQR6Q6TCH4 344 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 GTPBP8Q8N3Z3 284 aaPredicted RBP12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 CREB3L4Q8TEY5 395 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 SCARB1Q8WTV0 552 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 PTP4A1Q93096 173 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 NIPSNAP1Q9BPW8 284 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 CD244Q9BZW8 370 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 EXO5Q9H790 373 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 PLCH1Q4KWH8 1693 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 E7EQ34 232 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 TRIM77I1YAP6 450 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 MANBAO00462 879 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 GOSR2O14653 212 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 PI15O43692 258 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 CHP2O43745 196 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 CSO75390 466 aaKnown RBP12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 SNAPINO95295 136 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 H1F0P07305 194 aaKnown RBP12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 CTPS1P17812 591 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 GABRB1P18505 474 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 GRK4P32298 578 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 HMGCLP35914 325 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 CDK6Q00534 326 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 BAMBIQ13145 260 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 HIST2H2AA3Q6FI13 130 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 FAM83AQ86UY5 434 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 TRMT10AQ8TBZ6 339 aaKnown RBP12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 OSGEPL1Q9H4B0 414 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 NDRG3Q9UGV2 375 aa12.95□□□□□ -0.34
PPP4R3B-205ENST00000616288 SCN11AQ9UI33 1791 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 HYKKA2RU49 373 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 TARM1B6A8C7 271 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 SULT1C2O00338 296 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 PTP4A3O75365 173 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 B3GAT3O94766 335 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 PTNP21246 168 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 AIF1P55008 147 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 ZNF91Q05481 1191 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 RAET1GQ6H3X3 334 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 OR5T3Q8NGG3 340 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 C3orf49Q96BT1 292 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 RNF170Q96K19 258 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 MRGPRX2Q96LB1 330 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 TRPV4Q9HBA0 871 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 CNOT2Q9NZN8 540 aaKnown RBP12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 ATXN7L1Q9ULK2 861 aaPredicted RBP12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 EXO1Q9UQ84 846 aaKnown RBP12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 TMEM88BA6NKF7 163 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 LINC00587B1AMM8 73 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 HOXD4P09016 255 aaPredicted RBP12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 RPIAP49247 311 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 STC1P52823 247 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 TBX4P57082 545 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 TAS2R41P59536 307 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 SREBF2Q12772 1141 aa12.94□□□□□ -0.34
PPP4R3B-205ENST00000616288 AIMP2Q13155 320 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms