RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 PRMT9Q6P2P2 845 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 FAM199XQ6PEV8 388 aaPredicted RBP7.54□□□□□ -1.2
PCDH9-205ENST00000614931 CEACAM20Q6UY09 585 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 DGAT2L6Q6ZPD8 337 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 MSANTD1Q6ZTZ1 278 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 ZNF551Q7Z340 670 aaPredicted RBP7.54□□□□□ -1.2
PCDH9-205ENST00000614931 TIPARPQ7Z3E1 657 aaKnown RBP7.54□□□□□ -1.2
PCDH9-205ENST00000614931 R3HCC1LQ7Z5L2 792 aaKnown RBP7.54□□□□□ -1.2
PCDH9-205ENST00000614931 DHDDSQ86SQ9 333 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 BPHLQ86WA6 291 aaPredicted RBP7.54□□□□□ -1.2
PCDH9-205ENST00000614931 CLEC4FQ8N1N0 589 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 DPP10Q8N608 796 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 AMER2Q8N7J2 671 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 GALNT6Q8NCL4 622 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 DOK4Q8TEW6 326 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 STARD8Q92502 1023 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 TSLPQ969D9 159 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 COL26A1Q96A83 441 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 CLIP3Q96DZ5 547 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 CMTM5Q96DZ9 223 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 AURKBQ96GD4 344 aaPredicted RBP7.54□□□□□ -1.2
PCDH9-205ENST00000614931 MESP1Q9BRJ9 268 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 FAIM2Q9BWQ8 316 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 GLIPR2Q9H4G4 154 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 IKZF5Q9H5V7 419 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 RPF2Q9H7B2 306 aaKnown RBP7.54□□□□□ -1.2
PCDH9-205ENST00000614931 CXorf36Q9H7Y0 433 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 ANKRA2Q9H9E1 313 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 SLC35C2Q9NQQ7 365 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 NECTIN3Q9NQS3 549 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 SIRT3Q9NTG7 399 aaPredicted RBP7.54□□□□□ -1.2
PCDH9-205ENST00000614931 TXLNGQ9NUQ3 528 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 MRGBPQ9NV56 204 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 FAM120CQ9NX05 1096 aaKnown RBP7.54□□□□□ -1.2
PCDH9-205ENST00000614931 EHD3Q9NZN3 535 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 VAPAQ9P0L0 249 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 UTS2RQ9UKP6 389 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 MAPRE3Q9UPY8 281 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 NDUFAF1Q9Y375 327 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 AHCTF1Q8WYP5 2266 aa7.54□□□□□ -1.2
PCDH9-205ENST00000614931 EXPH5Q8NEV8 1989 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 IGLV3-12A0A075B6K2 115 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 A0A096LPI6 279 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 IGKV3D-11A0A0A0MRZ8 115 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 PRSS51A0A1B0GVH4 220 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 DYTNA2CJ06 578 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 MEN1O00255 615 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 RNASET2O00584 256 aaKnown RBP7.53□□□□□ -1.2
PCDH9-205ENST00000614931 ANGPT2O15123 496 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 RAD1O60671 282 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 STK17BO94768 372 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 RECKO95980 971 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 CT62P0C5K7 136 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 CPMP14384 443 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 LIFP15018 202 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 MAOAP21397 527 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 PTPN4P29074 926 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 SKP1P63208 163 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 HBA1P69905 142 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 ACTN3Q08043 901 aaPredicted RBP7.53□□□□□ -1.2
PCDH9-205ENST00000614931 HSPB3Q12988 150 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 NFYCQ13952 458 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 LY6DQ14210 128 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 MAPKAPK3Q16644 382 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 TRMT5Q32P41 509 aaKnown RBP7.53□□□□□ -1.2
PCDH9-205ENST00000614931 NKAIN1Q4KMZ8 207 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 COQ5Q5HYK3 327 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 LRIF1Q5T3J3 769 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 NIPAL1Q6NVV3 410 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 HACD2Q6Y1H2 254 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 SHISA6Q6ZSJ9 500 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 MED25Q71SY5 747 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 ASRGL1Q7L266 308 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 YTHDF3Q7Z739 585 aaKnown RBP7.53□□□□□ -1.2
PCDH9-205ENST00000614931 LAPTM4BQ86VI4 370 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 PRSS58Q8IYP2 241 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 C10orf111Q8N326 155 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 KIF2BQ8N4N8 673 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 IL22RA1Q8N6P7 574 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 ZSCAN1Q8NBB4 408 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 OR4A15Q8NGL6 344 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 UTP4Q969X6 686 aaKnown RBP7.53□□□□□ -1.2
PCDH9-205ENST00000614931 TBC1D20Q96BZ9 403 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 LRFN5Q96NI6 719 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 AMDHD1Q96NU7 426 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 CPPED1Q9BRF8 314 aaPredicted RBP7.53□□□□□ -1.2
PCDH9-205ENST00000614931 GPATCH1Q9BRR8 931 aaKnown RBP7.53□□□□□ -1.2
PCDH9-205ENST00000614931 YIPF2Q9BWQ6 316 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 ULBP3Q9BZM4 244 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 SEMA4CQ9C0C4 833 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 SLC7A5P2Q9GIP4 190 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 CHST8Q9H2A9 424 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 LRMDAQ9H2I8 198 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 WDR41Q9HAD4 459 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 CLK4Q9HAZ1 481 aaKnown RBP7.53□□□□□ -1.2
PCDH9-205ENST00000614931 PRTFDC1Q9NRG1 225 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 ATAD3AQ9NVI7 634 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 WDR70Q9NW82 654 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 CMTM6Q9NX76 183 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 MS4A12Q9NXJ0 267 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms