RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 JAK1P23458 1154 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 CCT5P48643 541 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 DNASE1L1P49184 302 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 MAPK12P53778 367 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 CASP9P55211 416 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 HSD17B7P56937 341 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 MLF1P58340 268 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 LAPTM5Q13571 262 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 CUL3Q13618 768 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 ABHD17BQ5VST6 288 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 EIF1ADQ8N9N8 165 aaKnown RBP5.28□□□□□ -1.56
CPNE3-208ENST00000614678 OR9A2Q8NGT5 310 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 DNAJB8Q8NHS0 232 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 SUN3Q8TAQ9 357 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 FBXO30Q8TB52 745 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 HAS2Q92819 552 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 PAIP2Q9BPZ3 127 aaKnown RBP5.28□□□□□ -1.56
CPNE3-208ENST00000614678 CCDC77Q9BR77 488 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 RTN4RQ9BZR6 473 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 MARCOQ9UEW3 520 aaPredicted RBP5.28□□□□□ -1.56
CPNE3-208ENST00000614678 TINAGQ9UJW2 476 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 LIPGQ9Y5X9 500 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 COPG1Q9Y678 874 aaKnown RBP5.28□□□□□ -1.56
CPNE3-208ENST00000614678 FOXE1O00358 373 aaPredicted RBP5.28□□□□□ -1.56
CPNE3-208ENST00000614678 CLDN4O14493 209 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 NR2F6P10588 404 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 TCEA1P23193 301 aaKnown RBP5.28□□□□□ -1.56
CPNE3-208ENST00000614678 HMOX2P30519 316 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 XKP51811 444 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 WNT3P56703 355 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 RNF4P78317 190 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 PTGR1Q14914 329 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 TNFAIP8L3Q5GJ75 292 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 ZNF766Q5HY98 468 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 SH2D4BQ5SQS7 431 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 C1QL3Q5VWW1 255 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 LIPMQ5VYY2 423 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 CEP128Q6ZU80 1094 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 SULF2Q8IWU5 870 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 CHERPQ8IWX8 916 aaKnown RBP5.28□□□□□ -1.56
CPNE3-208ENST00000614678 ACMSDQ8TDX5 336 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 TSSK3Q96PN8 268 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 SORT1Q99523 831 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 DEFB126Q9BYW3 111 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 PROK2Q9HC23 129 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 PNPOQ9NVS9 261 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 FLRT3Q9NZU0 649 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 VPS29Q9UBQ0 182 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 CACNA1CQ13936 2221 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 FAM166BA8MTA8 275 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 NPIPA5E9PKD4 350 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 PCDH7O60245 1069 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 DPM1O60762 260 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 PEX11AO75192 247 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 SLC25A12O75746 678 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 CPMP14384 443 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 PCSK2P16519 638 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 TAC1P20366 129 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 TDGF1P3P51864 188 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 SLC37A1P57057 533 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 FBXW4P57775 412 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 KCNC4Q03721 635 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 TLR1Q15399 786 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 GGTA1PQ4G0N0 100 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 NUDT13Q86X67 352 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 ZNF595Q8IYB9 648 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 KRTCAP2Q8N6L1 136 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 OR10G3Q8NGC4 313 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 M1APQ8TC57 530 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 ZNF681Q96N22 645 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 IP6K3Q96PC2 410 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 BARD1Q99728 777 aaKnown RBP5.28□□□□□ -1.56
CPNE3-208ENST00000614678 EPS8L2Q9H6S3 715 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 LYRM4Q9HD34 91 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 KCNK9Q9NPC2 374 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 MYOTQ9UBF9 498 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 TRPS1Q9UHF7 1281 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 NPIPA1Q9UND3 350 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 PRR14LQ5THK1 2151 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 GNG14A0A1W2PPG7 69 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 DYTNA2CJ06 578 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 UGDHO60701 494 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 UNC5CO95185 931 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 NADKO95544 446 aaPredicted RBP5.27□□□□□ -1.57
CPNE3-208ENST00000614678 KITP10721 976 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 NME5P56597 212 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 CHI3L2Q15782 390 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 TMEM35AQ53FP2 167 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 TTMPQ5BVD1 217 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 CFAP157Q5JU67 520 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 OR5M10Q6IEU7 315 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 LYPD8Q6UX82 237 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 ZNF551Q7Z340 670 aaPredicted RBP5.27□□□□□ -1.57
CPNE3-208ENST00000614678 FJX1Q86VR8 437 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 ZCCHC7Q8N3Z6 543 aaKnown RBP5.27□□□□□ -1.57
CPNE3-208ENST00000614678 MREGQ8N565 214 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 OR6Y1Q8NGX8 325 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 C16orf78Q8WTQ4 265 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 FAR1Q8WVX9 515 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 KLHL29Q96CT2 875 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms