RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 REEP4Q9H6H4 257 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 EPS8L2Q9H6S3 715 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 TAS2R7Q9NYW3 318 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 ABI3Q9P2A4 366 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 BAIAP2L1Q9UHR4 511 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 PPIEQ9UNP9 301 aaKnown RBP12.38□□□□□ -0.43
MDC1-209ENST00000613547 ZNF451Q9Y4E5 1061 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 USH1CQ9Y6N9 552 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 ZFHX4Q86UP3 3567 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 LAMA5O15230 3695 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 ZFYVE26Q68DK2 2539 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 GOLGA8QA0A0J9YX86 632 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 TRBV11-1A0A0K0K1C0 115 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 GOLGA8OA6NCC3 632 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 GOLGA8NF8WBI6 632 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 SDHDO14521 159 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 AKAP10O43572 662 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 LRATO95237 230 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 ATP1B1P05026 303 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 G6PDP11413 515 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 SPRED3Q2MJR0 410 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 LACTB2Q53H82 288 aaPredicted RBP12.37□□□□□ -0.43
MDC1-209ENST00000613547 ABHD17BQ5VST6 288 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 OGFOD2Q6N063 350 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 ISLR2Q6UXK2 745 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 HSDL2Q6YN16 418 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 ACAD11Q709F0 780 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 LARP4Q71RC2 724 aaKnown RBP eCLIP12.37□□□□□ -0.43
MDC1-209ENST00000613547 SIRT6Q8N6T7 355 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 BRIX1Q8TDN6 353 aaKnown RBP12.37□□□□□ -0.43
MDC1-209ENST00000613547 ELP5Q8TE02 316 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 NCLNQ969V3 563 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 FBXL20Q96IG2 436 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 ZNF354BQ96LW1 612 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 SMAD5Q99717 465 aaKnown RBP12.37□□□□□ -0.43
MDC1-209ENST00000613547 SIKE1Q9BRV8 207 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 CNPPD1Q9BV87 410 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 NUDT9Q9BW91 350 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 WDR55Q9H6Y2 383 aaPredicted RBP12.37□□□□□ -0.43
MDC1-209ENST00000613547 ZNF552Q9H707 407 aaPredicted RBP12.37□□□□□ -0.43
MDC1-209ENST00000613547 CXorf21Q9HAI6 301 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 ATAD3AQ9NVI7 634 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 PTGFRNQ9P2B2 879 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 CACNA1GO43497 2377 aa12.37□□□□□ -0.43
MDC1-209ENST00000613547 SCAMP2O15127 329 aaKnown RBP12.36□□□□□ -0.43
MDC1-209ENST00000613547 POLR3GO15318 223 aaPredicted RBP12.36□□□□□ -0.43
MDC1-209ENST00000613547 PDPK1O15530 556 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 TBX19O60806 448 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 EDF1O60869 148 aaKnown RBP12.36□□□□□ -0.43
MDC1-209ENST00000613547 ABCB7O75027 752 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 ZFAND5O76080 213 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 CELA2AP08217 269 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 PRPS1L1P21108 318 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 MDH1P40925 334 aaKnown RBP12.36□□□□□ -0.43
MDC1-209ENST00000613547 AQP5P55064 265 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 GUCY1A3Q02108 690 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 PDE7AQ13946 482 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 LY6DQ14210 128 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 ZNF267Q14586 743 aaPredicted RBP12.36□□□□□ -0.43
MDC1-209ENST00000613547 PTGR1Q14914 329 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 RPS6KA2Q15349 733 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 ZNF750Q32MQ0 723 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 EPGNQ6UW88 154 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 ASB18Q6ZVZ8 466 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 LGI4Q8N135 537 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 VWA5B2Q8N398 1253 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 NATD1Q8N6N6 113 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 EXD3Q8N9H8 876 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 APCDD1LQ8NCL9 501 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 OR5L2Q8NGL0 311 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 OR1N1Q8NGS0 311 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 ZFP28Q8NHY6 868 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 ACTRT2Q8TDY3 377 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 PSMF1Q92530 271 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 CNRIP1Q96F85 164 aaPredicted RBP12.36□□□□□ -0.43
MDC1-209ENST00000613547 SENP5Q96HI0 755 aaPredicted RBP12.36□□□□□ -0.43
MDC1-209ENST00000613547 MAELQ96JY0 434 aaKnown RBP12.36□□□□□ -0.43
MDC1-209ENST00000613547 ZNF681Q96N22 645 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 BRINP2Q9C0B6 783 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 SEMA4CQ9C0C4 833 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 SLC25A18Q9H1K4 315 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 SH3BP4Q9P0V3 963 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 TP53TG5Q9Y2B4 290 aa12.36□□□□□ -0.43
MDC1-209ENST00000613547 A0A1W2PS29 197 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 OR6C76A6NM76 312 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 DPM1O60762 260 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 SLITRK5O94991 958 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 DDAH2O95865 285 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 VIMP08670 466 aaKnown RBP12.35□□□□□ -0.43
MDC1-209ENST00000613547 TROVE2P10155 538 aaKnown RBP eCLIP12.35□□□□□ -0.43
MDC1-209ENST00000613547 IDO1P14902 403 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 SOX11P35716 441 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 GPR143P51810 404 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 NCBP2P52298 156 aaKnown RBP eCLIP12.35□□□□□ -0.43
MDC1-209ENST00000613547 DIO3P55073 304 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 CLDN8P56748 225 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 MFAP5Q13361 173 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 CEBPEQ15744 281 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 MEP1AQ16819 746 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 SLC9B1Q4ZJI4 515 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms