RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 MFSD8Q8NHS3 518 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 DAZLQ92904 295 aaKnown RBP16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 SGTBQ96EQ0 304 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 MEPEQ9NQ76 525 aaPredicted RBP16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 F5H0A9 414 aaPredicted RBP16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 RFPL2O75678 378 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 CSTAP01040 98 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 F7P08709 466 aaPredicted RBP16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 HOXB9P17482 250 aaPredicted RBP16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 PREPP48147 710 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 CD97P48960 835 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 PHB2Q99623 299 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 C14orf119Q9NWQ9 140 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 ASGR2P07307 311 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 CD3GP09693 182 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 CCND3P30281 292 aaPredicted RBP16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 UPP1Q16831 310 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 LY6G5CQ5SRR4 150 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 CYP4V2Q6ZWL3 525 aaPredicted RBP16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 ARL14Q8N4G2 192 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 OR5T2Q8NGG2 359 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 NAA11Q9BSU3 229 aaPredicted RBP16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 BEX2Q9BXY8 128 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 BEX1Q9HBH7 125 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 FBRSL1Q9HCM7 1045 aaKnown RBP16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 PAQR5Q9NXK6 330 aaPredicted RBP16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 VNN3Q9NY84 501 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 GXYLT2A0PJZ3 443 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 GRXCR1A8MXD5 290 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 KIAA0513O60268 411 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 ALDOAP04075 364 aaKnown RBP16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 OR12D1P0DN82 309 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 TUBG1P23258 451 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 HOXD13P35453 343 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 AGTR2P50052 363 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 NIPAL4Q0D2K0 466 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 NPRL3Q12980 569 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 COL28A1Q2UY09 1125 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 OR4K1Q8NGD4 311 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 LGALS12Q96DT0 336 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 NELL2Q99435 816 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 SLA2Q9H6Q3 261 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 FGF18O76093 207 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 ATG12O94817 140 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 CLIC3O95833 236 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 CELP19835 753 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 FXYD6P3P58550 94 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 PCBP2Q15366 365 aaKnown RBP eCLIP16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 MLIPQ5VWP3 458 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 LMO3Q8TAP4 145 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 CHFRQ96EP1 664 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 HYLS1Q96M11 299 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 HOXD1Q9GZZ0 328 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 ZFR2Q9UPR6 939 aaKnown RBP16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 A0A1W2PPL8 197 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 SLC35F4A4IF30 521 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 E2F3O00716 465 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 SCGB2A1O75556 95 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 IFNA5P01569 189 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 SPARCP09486 303 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 NDUFV2P19404 249 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 MYF6P23409 242 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 ADH6P28332 368 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 OR10Q1Q8NGQ4 319 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 IGSF21Q96ID5 467 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 FAIMQ9NVQ4 179 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 EPHA6Q9UF33 1036 aa16.67■□□□□ 0.26
HMGXB3-206ENST00000613459 IFT172Q9UG01 1749 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 SCAMP2O15127 329 aaKnown RBP16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 AADACL4Q5VUY2 407 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 FCRL3Q96P31 734 aaPredicted RBP16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 CNN2Q99439 309 aaKnown RBP16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 SYT4Q9H2B2 425 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 FAM118AQ9NWS6 357 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 ACSL6Q9UKU0 697 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 ASB4Q9Y574 426 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 CCDC85CA6NKD9 419 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 COCHO43405 550 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 SLC35E2BP0CK96 405 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 RNH1P13489 461 aaKnown RBP16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 GGT1P19440 569 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 SPHARQ15513 63 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 ZNF767PQ75MW2 155 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 CEACAM19Q7Z692 300 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 TREML1Q86YW5 311 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 RAB8BQ92930 207 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 MGLLQ99685 303 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 STRADBQ9C0K7 418 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 XYLT2Q9H1B5 865 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 SPHK2Q9NRA0 654 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 UCHL1P09936 223 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 ATXN7L3Q14CW9 347 aaPredicted RBP16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 LAPTM4AQ15012 233 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 CES4AQ5XG92 561 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 NXPE4Q6UWF7 544 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 Q6ZVL8 140 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 PDZD9Q8IXQ8 264 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 FTMTQ8N4E7 242 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 PBDC1Q9BVG4 233 aa16.66■□□□□ 0.26
HMGXB3-206ENST00000613459 ATG5Q9H1Y0 275 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms