RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 A0A1W2PQU0 124 aa13.33□□□□□ -0.27
PCDHGA3-202ENST00000612467 KMOO15229 486 aa13.33□□□□□ -0.27
PCDHGA3-202ENST00000612467 ERI3O43414 337 aaKnown RBP13.33□□□□□ -0.27
PCDHGA3-202ENST00000612467 AIREO43918 545 aa13.33□□□□□ -0.27
PCDHGA3-202ENST00000612467 OR10H3O60404 316 aa13.33□□□□□ -0.27
PCDHGA3-202ENST00000612467 DPM1O60762 260 aa13.33□□□□□ -0.27
PCDHGA3-202ENST00000612467 DNTTP04053 509 aa13.33□□□□□ -0.27
PCDHGA3-202ENST00000612467 PEBP1P30086 187 aaKnown RBP13.33□□□□□ -0.27
PCDHGA3-202ENST00000612467 TFF2Q03403 129 aa13.33□□□□□ -0.27
PCDHGA3-202ENST00000612467 ZNF770Q6IQ21 691 aaPredicted RBP13.33□□□□□ -0.27
PCDHGA3-202ENST00000612467 PSD4Q8NDX1 1056 aa13.33□□□□□ -0.27
PCDHGA3-202ENST00000612467 TREX2Q9BQ50 279 aaPredicted RBP13.33□□□□□ -0.27
PCDHGA3-202ENST00000612467 CHCHD6Q9BRQ6 235 aa13.33□□□□□ -0.27
PCDHGA3-202ENST00000612467 ZCCHC3Q9NUD5 404 aaKnown RBP13.33□□□□□ -0.27
PCDHGA3-202ENST00000612467 FBXL12Q9NXK8 326 aa13.33□□□□□ -0.27
PCDHGA3-202ENST00000612467 LRIT2A6NDA9 550 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 CEACAM5P06731 702 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 CKMT1AP12532 417 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 MAGP20916 626 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 AK4P27144 223 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 CERS1P27544 350 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 NCBP2P52298 156 aaKnown RBP eCLIP13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 RPA4Q13156 261 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 UBE2UQ5VVX9 321 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 FAM46CQ5VWP2 391 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 OR4C11Q6IEV9 310 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 SIMC1Q8NDZ2 872 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 CCL4L1Q8NHW4 92 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 IPCEF1Q8WWN9 437 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 RGMAQ96B86 450 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 KLHL25Q9H0H3 589 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 C6orf106Q9H6K1 298 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 PELI2Q9HAT8 420 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 CCNB1IP1Q9NPC3 277 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 FTSJ1Q9UET6 329 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 DAPK2Q9UIK4 370 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 FUOMA2VDF0 154 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 TTC36A6NLP5 189 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 H3BN98 237 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 EPPINO95925 133 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 ITGA2P17301 1181 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 RHCEP18577 417 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 ELAVL4P26378 380 aaKnown RBP13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 IGFALSP35858 605 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 RNF144AP50876 292 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 LBX1P52954 281 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 DBPQ10586 325 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 HYAL2Q12891 473 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 LASP1Q14847 261 aaKnown RBP13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 MED22Q15528 200 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 DUSP6Q16828 381 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 RGS21Q2M5E4 152 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 PTCHD4Q6ZW05 846 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 PHOSPHO2Q8TCD6 241 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 SLC38A4Q969I6 547 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 ZG16BQ96DA0 208 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 Q96MT0 163 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 SEMA3GQ9NS98 782 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 TRNAU1APQ9NX07 287 aaKnown RBP13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 SEC14L3Q9UDX4 400 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 CLEC2DQ9UHP7 191 aa13.33□□□□□ -0.28
PCDHGA3-202ENST00000612467 A0A1W2PR48 441 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 ENTPD6O75354 484 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 APOL3O95236 402 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 CHRM5P08912 532 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 CRISP1P54107 249 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 PPP2CBP62714 309 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 PPP2CAP67775 309 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 PRDX1Q06830 199 aaKnown RBP13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 SLAMF1Q13291 335 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 DGUOKQ16854 277 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 ARMCX4Q5H9R4 360 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 FRMPD2BQ6IN97 320 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 TMEM107Q6UX40 140 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 ZNF554Q86TJ5 538 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 YAF2Q8IY57 180 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 OR6Q1Q8NGQ2 317 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 SLC7A13Q8TCU3 470 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 AMDHD1Q96NU7 426 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 C6orf62Q9GZU0 229 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 RSPH9Q9H1X1 276 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 SFXN1Q9H9B4 322 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 FGF22Q9HCT0 170 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 NECTIN3Q9NQS3 549 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 ZNF232Q9UNY5 417 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 A0A0A6YYD5 115 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 POM121BA6NF01 834 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 TNNI3P19429 210 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 HOXC5Q00444 222 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 FUT5Q11128 374 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 COLEC12Q5KU26 742 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 TPRG1LQ5T0D9 272 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 C10orf62Q5T681 223 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 PAQR6Q6TCH4 344 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 CHPT1Q8WUD6 406 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 RAB7BQ96AH8 199 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 CNRIP1Q96F85 164 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 GPA33Q99795 319 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 REV1Q9UBZ9 1251 aa13.32□□□□□ -0.28
PCDHGA3-202ENST00000612467 DNAJB6O75190 326 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms