RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 EMX1Q04741 257 aaPredicted RBP11.29□□□□□ -0.6
USP6NL-206ENST00000609853 CCINQ13939 588 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 PUM1Q14671 1186 aaKnown RBP eCLIP11.29□□□□□ -0.6
USP6NL-206ENST00000609853 FAM180BQ6P0A1 224 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 RD3Q7Z3Z2 195 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 ABI3BPQ7Z7G0 1075 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 NRROSQ86YC3 692 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 TDHQ8IZJ6 230 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 TAGAPQ8N103 731 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 LINC00471Q8N535 108 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 ZNF540Q8NDQ6 660 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 FAM174AQ8TBP5 190 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 FCGR1BQ92637 280 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 TSACCQ96A04 125 aaPredicted RBP11.29□□□□□ -0.6
USP6NL-206ENST00000609853 TM4SF19Q96DZ7 209 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 DHRS1Q96LJ7 313 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 ALPK1Q96QP1 1244 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 CCDC90BQ9GZT6 254 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 TMEM168Q9H0V1 697 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 OR51I1Q9H343 314 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 ZNF576Q9H609 170 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 KCNK12Q9HB15 430 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 POT1Q9NUX5 634 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 PAK1IP1Q9NWT1 392 aaPredicted RBP11.29□□□□□ -0.6
USP6NL-206ENST00000609853 CALML5Q9NZT1 146 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 USP36Q9P275 1121 aaKnown RBP11.29□□□□□ -0.6
USP6NL-206ENST00000609853 SEC14L3Q9UDX4 400 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 ZNF780BQ9Y6R6 833 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 A0A0G2JPF8 293 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 HNRNPCL2B2RXH8 293 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 HNRNPCL3B7ZW38 293 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 H0Y8X5 98 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 BTN3A3O00478 584 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 CASC3O15234 703 aaKnown RBP11.29□□□□□ -0.6
USP6NL-206ENST00000609853 PPM1DO15297 605 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 EMC8O43402 210 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 XPNPEP2O43895 674 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 PCDHGA12O60330 932 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 ERAL1O75616 437 aaKnown RBP11.29□□□□□ -0.6
USP6NL-206ENST00000609853 ATE1O95260 518 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 EML2O95834 649 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 ADAP00813 363 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 HNRNPCL4P0DMR1 293 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 OR12D1P0DN82 309 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 CDK4P11802 303 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 EPHA2P29317 976 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 FMO3P31513 532 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 BUD31P41223 144 aaPredicted RBP11.29□□□□□ -0.6
USP6NL-206ENST00000609853 DCTN2Q13561 401 aaKnown RBP11.29□□□□□ -0.6
USP6NL-206ENST00000609853 SUZ12Q15022 739 aaKnown RBP11.29□□□□□ -0.6
USP6NL-206ENST00000609853 MAPK11Q15759 364 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 ALG11Q2TAA5 492 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 MANEAQ5SRI9 462 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 GPR153Q6NV75 609 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 ANKRD13BQ86YJ7 626 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 CCDC71Q8IV32 467 aaPredicted RBP11.29□□□□□ -0.6
USP6NL-206ENST00000609853 CROCCP3Q8IVE0 287 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 TRIM48Q8IWZ4 208 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 FAM20CQ8IXL6 584 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 ENTHD1Q8IYW4 607 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 OR52J3Q8NH60 311 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 RHOXF1Q8NHV9 184 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 GPBAR1Q8TDU6 330 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 NR4A3Q92570 626 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 RSC1A1Q92681 617 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 RAB8BQ92930 207 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 MYDGFQ969H8 173 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 SERINC2Q96SA4 455 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 GSDMCQ9BYG8 508 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 LIN28AQ9H9Z2 209 aaKnown RBP11.29□□□□□ -0.6
USP6NL-206ENST00000609853 POLMQ9NP87 494 aaPredicted RBP11.29□□□□□ -0.6
USP6NL-206ENST00000609853 MS4A12Q9NXJ0 267 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 TRPC4Q9UBN4 977 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 WARS2Q9UGM6 360 aaKnown RBP11.29□□□□□ -0.6
USP6NL-206ENST00000609853 APOBEC3BQ9UH17 382 aaKnown RBP11.29□□□□□ -0.6
USP6NL-206ENST00000609853 ACAD8Q9UKU7 415 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 MGAT4BQ9UQ53 548 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 LIPT1Q9Y234 373 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 SLC9A8Q9Y2E8 581 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 PCDHGA10Q9Y5H3 936 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 KIR2DS5A0A0G2JLQ3 304 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 A0A0G2JNG1 304 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 C4orf51C9J302 202 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 KIR2DS3K7RE56 304 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 FAAHO00519 579 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 AXIN1O15169 862 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 PGRMC2O15173 223 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 WBP4O75554 376 aaKnown RBP11.28□□□□□ -0.6
USP6NL-206ENST00000609853 RECKO95980 971 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 NR2F6P10588 404 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 POU3F3P20264 500 aaPredicted RBP11.28□□□□□ -0.6
USP6NL-206ENST00000609853 ACVR2AP27037 513 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 CERS1P27544 350 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 ST13P50502 369 aaKnown RBP11.28□□□□□ -0.6
USP6NL-206ENST00000609853 DGKEP52429 567 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 CDC42P60953 191 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 NFATC3Q12968 1075 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 KIR2DS5Q14953 304 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 PRRT3Q5FWE3 981 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 RPS26P11Q5JNZ5 115 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms