RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 RUNDC3AQ59EK9 446 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 VWA2Q5GFL6 755 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 YOD1Q5VVQ6 348 aaPredicted RBP10.86□□□□□ -0.67
CTCFL-221ENST00000608903 AP1ARQ63HQ0 302 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 DGAT2L6Q6ZPD8 337 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 RAB11FIP2Q7L804 512 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 LAPTM4BQ86VI4 370 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 GOT1L1Q8NHS2 421 aaPredicted RBP10.86□□□□□ -0.67
CTCFL-221ENST00000608903 TMEM125Q96AQ2 219 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 MVB12AQ96EY5 273 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 CXorf36Q9H7Y0 433 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 ZNF304Q9HCX3 659 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 MS4A12Q9NXJ0 267 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 SLC39A1Q9NY26 324 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 TMEM181Q9P2C4 612 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 PCDHB3Q9Y5E6 796 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 B3GALT1Q9Y5Z6 326 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 CEP250Q9BV73 2442 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 CNOT1A5YKK6 2376 aaKnown RBP10.86□□□□□ -0.67
CTCFL-221ENST00000608903 TEX51A0A1B0GUA7 166 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 FAM149AA5PLN7 773 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 ANKRD33BA6NCL7 494 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 RFXANKO14593 260 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 PDPK1O15530 556 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 BCAS2O75934 225 aaPredicted RBP10.85□□□□□ -0.67
CTCFL-221ENST00000608903 KCNH1O95259 989 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 TRPC1P48995 793 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 MTPNP58546 118 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 DSG2Q14126 1118 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 FLOT2Q14254 428 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.85□□□□□ -0.67
CTCFL-221ENST00000608903 ANXA8L1Q5VT79 327 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 LPCAT4Q643R3 524 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 ZC3H7AQ8IWR0 971 aaKnown RBP10.85□□□□□ -0.67
CTCFL-221ENST00000608903 AMER2Q8N7J2 671 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 SIMC1Q8NDZ2 872 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 BHLHE22Q8NFJ8 381 aaPredicted RBP10.85□□□□□ -0.67
CTCFL-221ENST00000608903 OR4A15Q8NGL6 344 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 NETO1Q8TDF5 533 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 COL26A1Q96A83 441 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 LIN37Q96GY3 246 aaPredicted RBP10.85□□□□□ -0.67
CTCFL-221ENST00000608903 PHF12Q96QT6 1004 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 PANX1Q96RD7 426 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 CMKLR1Q99788 373 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 CPPED1Q9BRF8 314 aaPredicted RBP10.85□□□□□ -0.67
CTCFL-221ENST00000608903 FAM192AQ9GZU8 254 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 PCDHAC1Q9H158 963 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 RMND5AQ9H871 391 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 ANKRA2Q9H9E1 313 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 ATAD3AQ9NVI7 634 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 GPATCH2Q9NW75 528 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 CTSFQ9UBX1 484 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 CD300AQ9UGN4 299 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 ACSL6Q9UKU0 697 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 CLCA2Q9UQC9 943 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 GFRA3O60609 400 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 NME6O75414 186 aaPredicted RBP10.85□□□□□ -0.67
CTCFL-221ENST00000608903 XKP51811 444 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 SLC7A2P52569 658 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 MAPK10P53779 464 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 MRPS22P82650 360 aaKnown RBP10.85□□□□□ -0.67
CTCFL-221ENST00000608903 PRMT9Q6P2P2 845 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 ZNF621Q6ZSS3 439 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 GPR155Q7Z3F1 870 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 ADCY4Q8NFM4 1077 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 OR4K14Q8NGD5 310 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 OR5P2Q8WZ92 322 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 TBC1D20Q96BZ9 403 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 EPS8L2Q9H6S3 715 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 CLK4Q9HAZ1 481 aaKnown RBP10.85□□□□□ -0.67
CTCFL-221ENST00000608903 NECTIN3Q9NQS3 549 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 GID8Q9NWU2 228 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 ABCD2Q9UBJ2 740 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 TRPC4Q9UBN4 977 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 SRPK3Q9UPE1 567 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 MAP4K5Q9Y4K4 846 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 PTPRBP23467 1997 aa10.85□□□□□ -0.67
CTCFL-221ENST00000608903 SLC30A4O14863 429 aa10.84□□□□□ -0.67
CTCFL-221ENST00000608903 ERN1O75460 977 aaKnown RBP10.84□□□□□ -0.67
CTCFL-221ENST00000608903 BMP10O95393 424 aa10.84□□□□□ -0.67
CTCFL-221ENST00000608903 GPR75O95800 540 aa10.84□□□□□ -0.67
CTCFL-221ENST00000608903 ONECUT2O95948 504 aa10.84□□□□□ -0.67
CTCFL-221ENST00000608903 RECKO95980 971 aa10.84□□□□□ -0.67
CTCFL-221ENST00000608903 FHP07954 510 aa10.84□□□□□ -0.67
CTCFL-221ENST00000608903 MAOAP21397 527 aa10.84□□□□□ -0.67
CTCFL-221ENST00000608903 FBLP22087 321 aaKnown RBP10.84□□□□□ -0.67
CTCFL-221ENST00000608903 PPP2R1BP30154 601 aa10.84□□□□□ -0.67
CTCFL-221ENST00000608903 TLX1P31314 330 aaPredicted RBP10.84□□□□□ -0.67
CTCFL-221ENST00000608903 GZMMP51124 257 aa10.84□□□□□ -0.67
CTCFL-221ENST00000608903 NCBP2P52298 156 aaKnown RBP eCLIP10.84□□□□□ -0.67
CTCFL-221ENST00000608903 MVDP53602 400 aa10.84□□□□□ -0.67
CTCFL-221ENST00000608903 MANFP55145 182 aaKnown RBP10.84□□□□□ -0.67
CTCFL-221ENST00000608903 CASP9P55211 416 aa10.84□□□□□ -0.67
CTCFL-221ENST00000608903 HSPB3Q12988 150 aa10.84□□□□□ -0.67
CTCFL-221ENST00000608903 TARDBPQ13148 414 aaKnown RBP eCLIP10.84□□□□□ -0.67
CTCFL-221ENST00000608903 LRRC36Q1X8D7 754 aa10.84□□□□□ -0.67
CTCFL-221ENST00000608903 NKAIN1Q4KMZ8 207 aa10.84□□□□□ -0.67
CTCFL-221ENST00000608903 ARHGAP40Q5TG30 622 aa10.84□□□□□ -0.67
CTCFL-221ENST00000608903 FAM199XQ6PEV8 388 aaPredicted RBP10.84□□□□□ -0.67
CTCFL-221ENST00000608903 MED25Q71SY5 747 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms