RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 CDC40O60508 579 aaKnown RBP eCLIP13.43□□□□□ -0.26
HDDC2-204ENST00000608295 ULK1O75385 1050 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 IL3P08700 152 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 NUDT17P0C025 328 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 PKNOX1P55347 436 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 CSTF3Q12996 717 aaKnown RBP13.43□□□□□ -0.26
HDDC2-204ENST00000608295 PCLAFQ15004 111 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 LTB4RQ15722 352 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 IMPG1Q17R60 797 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 RNFT1Q5M7Z0 435 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 SPDYAQ5MJ70 313 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 EMBQ6PCB8 327 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 TMEM64Q6YI46 380 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 FRMD7Q6ZUT3 714 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 C10orf107Q8IVU9 208 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 ST13P4Q8IZP2 240 aaPredicted RBP13.43□□□□□ -0.26
HDDC2-204ENST00000608295 OR5M3Q8NGP4 307 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 AGR3Q8TD06 166 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.43□□□□□ -0.26
HDDC2-204ENST00000608295 RIT1Q92963 219 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 APIPQ96GX9 242 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 PARD6BQ9BYG5 372 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 BRINP2Q9C0B6 783 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 BRF2Q9HAW0 419 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 VPS29Q9UBQ0 182 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 PPT2Q9UMR5 302 aa13.43□□□□□ -0.26
HDDC2-204ENST00000608295 YARS2Q9Y2Z4 477 aaKnown RBP13.43□□□□□ -0.26
HDDC2-204ENST00000608295 SPTAN1Q13813 2472 aaKnown RBP13.42□□□□□ -0.26
HDDC2-204ENST00000608295 PINLYPA6NC86 204 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 TFECO14948 347 aaPredicted RBP13.42□□□□□ -0.26
HDDC2-204ENST00000608295 ENO1P06733 434 aaKnown RBP13.42□□□□□ -0.26
HDDC2-204ENST00000608295 CREB1P16220 341 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 TRHRP34981 398 aaPredicted RBP13.42□□□□□ -0.26
HDDC2-204ENST00000608295 CRHR1P34998 444 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 DEKP35659 375 aaKnown RBP13.42□□□□□ -0.26
HDDC2-204ENST00000608295 ARFIP1P53367 373 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 DUSP2Q05923 314 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 ACSM2AQ08AH3 577 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 KRT71Q3SY84 523 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 C6orf163Q5TEZ5 329 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 PRAMEF20Q5VT98 475 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 LIPMQ5VYY2 423 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 ACSM2BQ68CK6 577 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 WDR93Q6P2C0 686 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 ZCCHC23Q6ZST2 131 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 TRABD2AQ86V40 505 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 SULF2Q8IWU5 870 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 GALNT12Q8IXK2 581 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 PSD4Q8NDX1 1056 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 ADCY4Q8NFM4 1077 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 MYRIPQ8NFW9 859 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 OR4K14Q8NGD5 310 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 CAVIN3Q969G5 261 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 CCDC126Q96EE4 140 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 FBXL20Q96IG2 436 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 CENPHQ9H3R5 247 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 DEPPQ9NTK1 212 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 PSD3Q9NYI0 1048 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 ADAM29Q9UKF5 820 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 SLC5A6Q9Y289 635 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 STK38LQ9Y2H1 464 aa13.42□□□□□ -0.26
HDDC2-204ENST00000608295 KLF13Q9Y2Y9 288 aaPredicted RBP13.42□□□□□ -0.26
HDDC2-204ENST00000608295 POLR3HQ9Y535 204 aaPredicted RBP13.42□□□□□ -0.26
HDDC2-204ENST00000608295 EXPH5Q8NEV8 1989 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 SPTBN1Q01082 2364 aaKnown RBP13.41□□□□□ -0.26
HDDC2-204ENST00000608295 PEX1O43933 1283 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 HS6ST1O60243 411 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 ZG16O60844 167 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 CLPSP04118 112 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 IGKV3-11P04433 115 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 CPMP14384 443 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 TIA1P31483 386 aaKnown RBP eCLIP13.41□□□□□ -0.269e-6■□□□□ 8.3
HDDC2-204ENST00000608295 DNASE1L1P49184 302 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 XKP51811 444 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 NR0B1P51843 470 aaKnown RBP13.41□□□□□ -0.26
HDDC2-204ENST00000608295 RAE1P78406 368 aaKnown RBP13.41□□□□□ -0.26
HDDC2-204ENST00000608295 PLGLB1Q02325 96 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 SLC18A2Q05940 514 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 EXOSC7Q15024 291 aaKnown RBP13.41□□□□□ -0.26
HDDC2-204ENST00000608295 C10orf62Q5T681 223 aaPredicted RBP13.41□□□□□ -0.26
HDDC2-204ENST00000608295 SLC48A1Q6P1K1 146 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 FAM111BQ6SJ93 734 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 NCCRP1Q6ZVX7 275 aaPredicted RBP13.41□□□□□ -0.26
HDDC2-204ENST00000608295 SLC29A4Q7RTT9 530 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 PRR22Q8IZ63 422 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 BANPQ8N9N5 519 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 FAM13CQ8NE31 585 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 RDH11Q8TC12 318 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 EXOSC8Q96B26 276 aaKnown RBP13.41□□□□□ -0.26
HDDC2-204ENST00000608295 TM4SF18Q96CE8 201 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 MAGED4Q96JG8 741 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 ART5Q96L15 291 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 PELOQ9BRX2 385 aaKnown RBP13.41□□□□□ -0.26
HDDC2-204ENST00000608295 TIMMDC1Q9NPL8 285 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 OXSMQ9NWU1 459 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 NMRK1Q9NWW6 199 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 HEY2Q9UBP5 337 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 LGALS13Q9UHV8 139 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 TINAGQ9UJW2 476 aa13.41□□□□□ -0.26
HDDC2-204ENST00000608295 PCDHA9Q9Y5H5 950 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms