RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 MRPS2Q9Y399 296 aaKnown RBP11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 DUXAA6NLW8 204 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 WASHC1A8K0Z3 465 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 KHNYNO15037 678 aaKnown RBP11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ZNF749O43361 778 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 HCRTR1O43613 425 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 FOXS1O43638 330 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PLOD3O60568 738 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SERPINA1P01009 418 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SEMG1P04279 462 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 NTRK1P04629 796 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ETFAP13804 333 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 EFNA1P20827 205 aaPredicted RBP11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PPM1FP49593 454 aaPredicted RBP11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ITGA1P56199 1179 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 HSD17B7P56937 341 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CDK6Q00534 326 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ACY1Q03154 408 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SCARB2Q14108 478 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 GK3PQ14409 553 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 DEFB110Q30KQ9 67 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 NKAIN2Q5VXU1 208 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 LAIR1Q6GTX8 287 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 REEP3Q6NUK4 255 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ANGPTL8Q6UXH0 198 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CEACAM20Q6UY09 585 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PIWIL3Q7Z3Z3 882 aaKnown RBP11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ARHGAP22Q7Z5H3 698 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 GATAD2AQ86YP4 633 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 GPR135Q8IZ08 494 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 OR2L13Q8N349 312 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 NETO1Q8TDF5 533 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 DNAJC9Q8WXX5 260 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 FKBP10Q96AY3 582 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PPWD1Q96BP3 646 aaKnown RBP11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ELP4Q96EB1 424 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SLC47A1Q96FL8 570 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 MS4A4EQ96PG1 132 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 BTBD2Q9BX70 525 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ZMYND15Q9H091 742 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 LRRN3Q9H3W5 708 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PIF1Q9H611 641 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 BCL2L10Q9HD36 194 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ZCCHC3Q9NUD5 404 aaKnown RBP11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CALML5Q9NZT1 146 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 C5AR2Q9P296 337 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 P2RX2Q9UBL9 471 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 RAPGEFL1Q9UHV5 662 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SERTAD3Q9UJW9 196 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 RAB23Q9ULC3 237 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 LIPT1Q9Y234 373 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 MMACHCQ9Y4U1 282 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SNX8Q9Y5X2 465 aa11.56□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CLDN4O14493 209 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 DSCR3O14972 297 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 FLRT2O43155 660 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CHST10O43529 356 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CTNSO60931 367 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 OR2B3O76000 313 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 LDLRP01130 860 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 GUSBP08236 651 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SLC35E2P0CK97 266 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PEX2P28328 305 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 GRK6P43250 576 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ERFP50548 548 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CLCN2P51788 898 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 XKP51811 444 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SHC2P98077 582 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 COX20Q5RI15 118 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 GUSBP11Q6P575 273 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PRSS41Q7RTY9 318 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CCDC116Q8IYX3 515 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 OR9A4Q8NGU2 314 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PNPT1Q8TCS8 783 aaKnown RBP11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 LRTOMTQ8WZ04 291 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 LZICQ8WZA0 190 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PMM1Q92871 262 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CSF3RQ99062 836 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 C9orf16Q9BUW7 83 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CHID1Q9BWS9 393 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 IL1RAPQ9NPH3 570 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CUTCQ9NTM9 273 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 DNAJB9Q9UBS3 223 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ZNF639Q9UID6 485 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 GMEB2Q9UKD1 530 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ACSL6Q9UKU0 697 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PADI2Q9Y2J8 665 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 DTNAQ9Y4J8 743 aa11.55□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 GLOD5A6NK44 160 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 TTC36A6NLP5 189 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PATE3B3GLJ2 98 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 TMEM150CB9EJG8 249 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SGK494L7N484 410 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 HMGN4O00479 90 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 NTN3O00634 580 aaPredicted RBP11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CLOCKO15516 846 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SUV39H1O43463 412 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 RDH16O75452 317 aa11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PRKRAO75569 313 aaKnown RBP11.54□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 TIPRLO75663 272 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms