RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 MID2Q9UJV3 735 aa20.29■□□□□ 0.84
PPFIA3-208ENST00000602726 NPIPA1Q9UND3 350 aa20.29■□□□□ 0.84
PPFIA3-208ENST00000602726 TIMM22Q9Y584 194 aa20.29■□□□□ 0.84
PPFIA3-208ENST00000602726 PCDHA9Q9Y5H5 950 aa20.29■□□□□ 0.84
PPFIA3-208ENST00000602726 PEX1O43933 1283 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 LDLRP01130 860 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 CHN1P15882 459 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 ZNF24P17028 368 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 DEKP35659 375 aaKnown RBP20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 MEOX1P50221 254 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 HTR6P50406 440 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 XKP51811 444 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 KRTCAP3Q53RY4 240 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 RNF111Q6ZNA4 994 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 FRMD7Q6ZUT3 714 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 C9orf40Q8IXQ3 194 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 POGLUT1Q8NBL1 392 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 NUBPLQ8TB37 319 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 CHTF18Q8WVB6 975 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 CAVIN3Q969G5 261 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 TM4SF18Q96CE8 201 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 GPR137Q96N19 417 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 KCNA7Q96RP8 456 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 FAIM2Q9BWQ8 316 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 ACPTQ9BZG2 426 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 OXSMQ9NWU1 459 aa20.28■□□□□ 0.84
PPFIA3-208ENST00000602726 A0A1B0GUH1 482 aa20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 A0A1W2PS29 197 aa20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 C1orf226A1L170 272 aa20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 WIPF3A6NGB9 483 aa20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 H3BQF6 201 aa20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 UBFD1O14562 309 aaKnown RBP20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 CRCPO75575 148 aa20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 WISP2O76076 250 aa20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 GP1BBP13224 206 aa20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 PER3P56645 1201 aa20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 TRA2BP62995 288 aaKnown RBP20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 ASPHQ12797 758 aa20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 MPEG1Q2M385 716 aa20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 PIGGQ5H8A4 983 aa20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 C1QL3Q5VWW1 255 aa20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 SLC48A1Q6P1K1 146 aa20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 OPN5Q6U736 354 aa20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 SLC29A4Q7RTT9 530 aa20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 PSD4Q8NDX1 1056 aa20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 ROPN1BQ9BZX4 212 aaPredicted RBP20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 ROPN1Q9HAT0 212 aaPredicted RBP20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 MCM8Q9UJA3 840 aa20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 PSME2Q9UL46 239 aa20.27■□□□□ 0.84
PPFIA3-208ENST00000602726 CPMP14384 443 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 PORP16435 677 aaPredicted RBP20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 GPR85P60893 370 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 HMGCS1Q01581 520 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 ACSM2AQ08AH3 577 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 ERCC6LQ2NKX8 1250 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 SPIN4Q56A73 249 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 C6orf163Q5TEZ5 329 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 LIPMQ5VYY2 423 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 ACSM2BQ68CK6 577 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 SCIMPQ6UWF3 145 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 RTL4Q6ZR62 310 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 TRABD2AQ86V40 505 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 SIAH3Q8IW03 269 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 GALNT12Q8IXK2 581 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 SLC22A8Q8TCC7 542 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 APOPT1Q96IL0 206 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 GAL3ST4Q96RP7 486 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 CXorf21Q9HAI6 301 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 LGALS13Q9UHV8 139 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 PLLPQ9Y342 182 aa20.26■□□□□ 0.83
PPFIA3-208ENST00000602726 TRGV8A0A0C4DH27 118 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 GOLGA6L10A6NI86 522 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 OR6C76A6NM76 312 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 PCDH7O60245 1069 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 ERAL1O75616 437 aaKnown RBP20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 NT5EP21589 574 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 RFC3P40938 356 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 ALDH9A1P49189 494 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 FOXA1P55317 472 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 SLC37A1P57057 533 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 BTKQ06187 659 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 ZNF750Q32MQ0 723 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 RNFT1Q5M7Z0 435 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 FJX1Q86VR8 437 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 C10orf107Q8IVU9 208 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 SRRM1Q8IYB3 904 aaKnown RBP20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 MMP21Q8N119 569 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 BANPQ8N9N5 519 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 SGCZQ96LD1 299 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 PARD6BQ9BYG5 372 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 MKS1Q9NXB0 559 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 CES1P1Q9UKY3 287 aa20.25■□□□□ 0.83
PPFIA3-208ENST00000602726 GNG14A0A1W2PPG7 69 aa20.24■□□□□ 0.83
PPFIA3-208ENST00000602726 A1L4Q6 167 aa20.24■□□□□ 0.83
PPFIA3-208ENST00000602726 SERTM1A2A2V5 107 aa20.24■□□□□ 0.83
PPFIA3-208ENST00000602726 TFECO14948 347 aaPredicted RBP20.24■□□□□ 0.83
PPFIA3-208ENST00000602726 ASNA1O43681 348 aa20.24■□□□□ 0.83
PPFIA3-208ENST00000602726 ZNF354AO60765 605 aaPredicted RBP20.24■□□□□ 0.83
PPFIA3-208ENST00000602726 SSTR4P31391 388 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms