RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 INTS1Q8N201 2190 aaKnown RBP16.55■□□□□ 0.24
CHMP2A-208ENST00000601220 TRIM3O75382 744 aaPredicted RBP16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 PTX3P26022 381 aaPredicted RBP16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 TLX1P31314 330 aaPredicted RBP16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 DNAJA1P31689 397 aaKnown RBP16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 GALNSP34059 522 aa16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 PLTPP55058 493 aa16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 TBL3Q12788 808 aaKnown RBP16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 ZNF267Q14586 743 aaPredicted RBP16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 SLMAPQ14BN4 828 aa16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 SETDB1Q15047 1291 aa16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 NTRK2Q16620 822 aa16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 SLC25A35Q3KQZ1 300 aa16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 RIPPLY2Q5TAB7 128 aa16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 DND1Q8IYX4 353 aaKnown RBP16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 WDR20Q8TBZ3 569 aa16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 NTNG2Q96CW9 530 aa16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 SLC24A3Q9HC58 644 aa16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 RYDENQ9NUL5 291 aaKnown RBP16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 QPCTLQ9NXS2 382 aa16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 CNIH4Q9P003 139 aa16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 ACOT9Q9Y305 439 aa16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 PCDHGA11Q9Y5H2 935 aa16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 MED13LQ71F56 2210 aa16.54■□□□□ 0.24
CHMP2A-208ENST00000601220 EML6Q6ZMW3 1958 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 IQANK1A0A1B0GTG1 560 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 A0A1W2PS29 197 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 FAM221AA4D161 298 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 ANKRD33BA6NCL7 494 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 GLOD5A6NK44 160 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 DYRK3O43781 588 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 CTAG2O75638 210 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 C2P06681 752 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 GABRA1P14867 456 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 CD1EP15812 388 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 SERPINB3P29508 390 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 RAP1GDS1P52306 607 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 KCNJ2P63252 427 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 C2orf54Q08AI8 447 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 NAB1Q13506 487 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 CUL3Q13618 768 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 PCBP2Q15366 365 aaKnown RBP eCLIP16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 PFKFB4Q16877 469 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 TMEM200AQ86VY9 491 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 ULK2Q8IYT8 1036 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 L3MBTL4Q8NA19 623 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 NEIL3Q8TAT5 605 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 RIT1Q92963 219 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 PELOQ9BRX2 385 aaKnown RBP16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 SLC6A15Q9H2J7 730 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 LYARQ9NX58 379 aaKnown RBP16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 ALKBH4Q9NXW9 302 aa16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 BOKQ9UMX3 212 aaPredicted RBP16.53■□□□□ 0.24
CHMP2A-208ENST00000601220 CCDC189A1A4V9 331 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 OR6C76A6NM76 312 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 SYCE1LA8MT33 242 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 KDM4EB2RXH2 506 aaPredicted RBP16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 SYT5O00445 386 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 PGRMC2O15173 223 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 UGDHO60701 494 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 LRATO95237 230 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 AIFM1O95831 613 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 FAM58BPP0C7Q3 252 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 SLC35E2P0CK97 266 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 STX2P32856 288 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 BUD31P41223 144 aaPredicted RBP16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 NEK2P51955 445 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 ART1P52961 327 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 ALDH18A1P54886 795 aaKnown RBP16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 CAV1Q03135 178 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 MYBPHQ13203 477 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 POMZP3Q6PJE2 187 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 ARSKQ6UWY0 536 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 TMEM64Q6YI46 380 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 RNF111Q6ZNA4 994 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 SLC29A4Q7RTT9 530 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 FAM13CQ8NE31 585 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 GAL3ST4Q96RP7 486 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 CENPKQ9BS16 269 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 CXXC4Q9H2H0 198 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 EXO5Q9H790 373 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 ACTR8Q9H981 624 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 CXorf21Q9HAI6 301 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 RNF11Q9Y3C5 154 aa16.52■□□□□ 0.24
CHMP2A-208ENST00000601220 A0A087X1B8 175 aa16.51■□□□□ 0.23
CHMP2A-208ENST00000601220 FOXE1O00358 373 aaPredicted RBP16.51■□□□□ 0.23
CHMP2A-208ENST00000601220 NR2F6P10588 404 aa16.51■□□□□ 0.23
CHMP2A-208ENST00000601220 SSTR4P31391 388 aa16.51■□□□□ 0.23
CHMP2A-208ENST00000601220 CEACAM8P31997 349 aaPredicted RBP16.51■□□□□ 0.23
CHMP2A-208ENST00000601220 IST1P53990 364 aa16.51■□□□□ 0.23
CHMP2A-208ENST00000601220 SNTB1Q13884 538 aaKnown RBP16.51■□□□□ 0.23
CHMP2A-208ENST00000601220 GTF2H2Q13888 395 aa16.51■□□□□ 0.23
CHMP2A-208ENST00000601220 ACAP2Q15057 778 aa16.51■□□□□ 0.23
CHMP2A-208ENST00000601220 CPSF6Q16630 551 aaKnown RBP eCLIP16.51■□□□□ 0.23
CHMP2A-208ENST00000601220 FAM83EQ2M2I3 478 aa16.51■□□□□ 0.23
CHMP2A-208ENST00000601220 MROH9Q5TGP6 573 aa16.51■□□□□ 0.23
CHMP2A-208ENST00000601220 FNDC7Q5VTL7 733 aa16.51■□□□□ 0.23
CHMP2A-208ENST00000601220 GTF2H2CQ6P1K8 395 aa16.51■□□□□ 0.23
CHMP2A-208ENST00000601220 GOLGA7Q7Z5G4 137 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms