RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 PRKRAO75569 313 aaKnown RBP14.59□□□□□ -0.07
VRK3-221ENST00000600284 NADKO95544 446 aaPredicted RBP14.59□□□□□ -0.07
VRK3-221ENST00000600284 OTCP00480 354 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 RPS17P08708 135 aaKnown RBP14.59□□□□□ -0.07
VRK3-221ENST00000600284 ABHD2P08910 425 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 CCL3P10147 92 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 SERPINB3P29508 390 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 HERVK_113P63132 956 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 ERVK-8P63133 956 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 ZNF267Q14586 743 aaPredicted RBP14.59□□□□□ -0.07
VRK3-221ENST00000600284 CDSNQ15517 529 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 LYPD8Q6UX82 237 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 RNF111Q6ZNA4 994 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 TIFABQ6ZNK6 161 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 LCA5Q86VQ0 697 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 SRRM1Q8IYB3 904 aaKnown RBP14.59□□□□□ -0.07
VRK3-221ENST00000600284 TMEM151AQ8N4L1 468 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 TMEM251Q8N6I4 163 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 CA5BP1Q8WTZ4 195 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 ASB5Q8WWX0 329 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 SREK1Q8WXA9 508 aaKnown RBP14.59□□□□□ -0.07
VRK3-221ENST00000600284 TP53INP1Q96A56 240 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 MTBPQ96DY7 904 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 SPACA9Q96E40 222 aaPredicted RBP14.59□□□□□ -0.07
VRK3-221ENST00000600284 NSUN5Q96P11 429 aaKnown RBP14.59□□□□□ -0.07
VRK3-221ENST00000600284 SPOCK3Q9BQ16 436 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 CNPPD1Q9BV87 410 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 ERVK-6Q9BXR3 956 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 ELOVL6Q9H5J4 265 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 CNIH4Q9P003 139 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 ERVK-19Q9WJR5 959 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 HRH3Q9Y5N1 445 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 A0A0G2JMM0 328 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 EXOC1LA0A1B0GW35 172 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 A0A1W2PPB8 328 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 A0A1W2PRS3 328 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 WASHC1A8K0Z3 465 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 KIR3DP1A8MWS1 328 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 BCKDKO14874 412 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 PGRMC2O15173 223 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 SUSD5O60279 629 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 FBXO45P0C2W1 286 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 PIK3R1P27986 724 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 SLC10A1Q14973 349 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 EBPQ15125 230 aaKnown RBP14.58□□□□□ -0.08
VRK3-221ENST00000600284 GXYLT1Q4G148 440 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 ADGRD1Q6QNK2 874 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 NCCRP1Q6ZVX7 275 aaPredicted RBP14.58□□□□□ -0.08
VRK3-221ENST00000600284 TRMT10CQ7L0Y3 403 aaKnown RBP14.58□□□□□ -0.08
VRK3-221ENST00000600284 TAGAPQ8N103 731 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 METTL4Q8N3J2 472 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 FBXW8Q8N3Y1 598 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 CEP112Q8N8E3 955 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 OR4F6Q8NGB9 312 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 OR4K14Q8NGD5 310 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 KIF18AQ8NI77 898 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 ZNF483Q8TF39 744 aaPredicted RBP14.58□□□□□ -0.08
VRK3-221ENST00000600284 SDCCAG3Q96C92 435 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 WWTR1Q9GZV5 400 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 CXorf21Q9HAI6 301 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 BRF2Q9HAW0 419 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 SEMA4BQ9NPR2 832 aaPredicted RBP14.58□□□□□ -0.08
VRK3-221ENST00000600284 NMRK1Q9NWW6 199 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 SNX6Q9UNH7 406 aa14.58□□□□□ -0.08
VRK3-221ENST00000600284 A8MT66 165 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 CAPN14A8MX76 684 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 G3V3Y1 287 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 AQP7O14520 342 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 HCN1O60741 890 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 GBAP04062 536 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 KLK1P06870 262 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 SBK3P0C264 359 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 TAC1P20366 129 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 MAGEA5P43359 124 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 DNASE1L1P49184 302 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 FUT7Q11130 342 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 EMC4Q5J8M3 183 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 CCNYL2Q5T2Q4 361 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 ACAD11Q709F0 780 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 TRILQ7L0X0 811 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 GALNT12Q8IXK2 581 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 IFT20Q8IY31 132 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 MARVELD2Q8N4S9 558 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 ACBD4Q8NC06 268 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 UHMK1Q8TAS1 419 aaKnown RBP14.57□□□□□ -0.08
VRK3-221ENST00000600284 RND1Q92730 232 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 GAL3ST4Q96RP7 486 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 MRPL1Q9BYD6 325 aaKnown RBP14.57□□□□□ -0.08
VRK3-221ENST00000600284 ENKD1Q9H0I2 346 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 TEX10Q9NXF1 929 aaPredicted RBP14.57□□□□□ -0.08
VRK3-221ENST00000600284 QPCTLQ9NXS2 382 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 TUBA8Q9NY65 449 aaPredicted RBP14.57□□□□□ -0.08
VRK3-221ENST00000600284 TRPS1Q9UHF7 1281 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 BOKQ9UMX3 212 aaPredicted RBP14.57□□□□□ -0.08
VRK3-221ENST00000600284 CHCHD2Q9Y6H1 151 aaPredicted RBP14.57□□□□□ -0.08
VRK3-221ENST00000600284 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.57□□□□□ -0.08
VRK3-221ENST00000600284 MYO9AB2RTY4 2548 aa14.57□□□□□ -0.08
VRK3-221ENST00000600284 C2orf92A0A1B0GVN3 265 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 C1orf226A1L170 272 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 ANKRD33BA6NCL7 494 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms