RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 PLIN5Q00G26 463 aa18.13■□□□□ 0.49
SHKBP1-221ENST00000599833 DUSP8Q13202 625 aa18.13■□□□□ 0.49
SHKBP1-221ENST00000599833 MEP1AQ16819 746 aa18.13■□□□□ 0.49
SHKBP1-221ENST00000599833 PRR30Q53SZ7 412 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-221ENST00000599833 C9orf40Q8IXQ3 194 aa18.13■□□□□ 0.49
SHKBP1-221ENST00000599833 ZADH2Q8N4Q0 377 aa18.13■□□□□ 0.49
SHKBP1-221ENST00000599833 C7orf57Q8NEG2 295 aa18.13■□□□□ 0.49
SHKBP1-221ENST00000599833 TM9SF4Q92544 642 aa18.13■□□□□ 0.49
SHKBP1-221ENST00000599833 FBXL20Q96IG2 436 aa18.13■□□□□ 0.49
SHKBP1-221ENST00000599833 ZNF354BQ96LW1 612 aa18.13■□□□□ 0.49
SHKBP1-221ENST00000599833 CDCP1Q9H5V8 836 aa18.13■□□□□ 0.49
SHKBP1-221ENST00000599833 TRIM45Q9H8W5 580 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-221ENST00000599833 STMN3Q9NZ72 180 aa18.13■□□□□ 0.49
SHKBP1-221ENST00000599833 ZNF639Q9UID6 485 aa18.13■□□□□ 0.49
SHKBP1-221ENST00000599833 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-221ENST00000599833 GNG14A0A1W2PPG7 69 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 GUCY1B2O75343 617 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 SKAP2O75563 359 aaPredicted RBP18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 HSPA4LO95757 839 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 ATP1B1P05026 303 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 DRD2P14416 443 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 PLA2G2AP14555 144 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 PTGER1P34995 402 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 GSTM5P46439 218 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 HK2P52789 917 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 SLC37A1P57057 533 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 STX3Q13277 289 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 TUBA3CQ13748 450 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 NR6A1Q15406 480 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 PRICKLE4Q2TBC4 344 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 HHATQ5VTY9 493 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 TUBA3EQ6PEY2 450 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 RPS19BP1Q86WX3 136 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 SLC5A8Q8N695 610 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 MDS2Q8NDY4 140 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 OR8K3Q8NH51 312 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 SUN3Q8TAQ9 357 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 CTHRC1Q96CG8 243 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 RBM18Q96H35 190 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 SIGLEC12Q96PQ1 595 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 PELOQ9BRX2 385 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 OR8D2Q9GZM6 311 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 LIN28AQ9H9Z2 209 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 EHD3Q9NZN3 535 aa18.12■□□□□ 0.49
SHKBP1-221ENST00000599833 ATP6AP2A0A1C7CYW4 349 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 OR5H15A6NDH6 313 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 SEC22BO75396 215 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 ATP6AP2O75787 350 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 NEURL1O76050 574 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 DDCP20711 480 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 PIK3R1P27986 724 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 TRHRP34981 398 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 RPL38P63173 70 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 RNF4P78317 190 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 OCRLQ01968 901 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 FUT7Q11130 342 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 MPEG1Q2M385 716 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 ABHD17BQ5VST6 288 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 HOMEZQ8IX15 550 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 DDIASQ8IXT1 998 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 ZNF615Q8N8J6 731 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 SIMC1Q8NDZ2 872 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 PPP1R14CQ8TAE6 165 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 BARD1Q99728 777 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 PAIP2Q9BPZ3 127 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 FAIM2Q9BWQ8 316 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 DEFB126Q9BYW3 111 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 PNPOQ9NVS9 261 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 TAS2R7Q9NYW3 318 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 MAT2BQ9NZL9 334 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 NTNG1Q9Y2I2 539 aa18.11■□□□□ 0.49
SHKBP1-221ENST00000599833 MYO18BQ8IUG5 2567 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 EXPH5Q8NEV8 1989 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 GABRR3A8MPY1 467 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 ZFAND5O76080 213 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 SNUPNO95149 360 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 CHEK2O96017 543 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 PORP16435 677 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 TNNI3P19429 210 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 SSTR4P31391 388 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 FEN1P39748 380 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 CD96P40200 585 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 ALDH9A1P49189 494 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 MLLT10P55197 1068 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 ERVK-8P63133 956 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 ZNF169Q14929 603 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 HEPACAMQ14CZ8 416 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 LTB4RQ15722 352 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 C6orf136Q5SQH8 315 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 HSDL2Q6YN16 418 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 IKBIPQ70UQ0 350 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 ZNF441Q8N8Z8 693 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 RAB3IL1Q8TBN0 382 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 THAP3Q8WTV1 239 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 RIT1Q92963 219 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 KLHL29Q96CT2 875 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 C19orf60Q96EN9 201 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 CCT7Q99832 543 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 SLAMF7Q9NQ25 335 aa18.1■□□□□ 0.49
SHKBP1-221ENST00000599833 MYOTQ9UBF9 498 aa18.1■□□□□ 0.49
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