RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 OGFOD2Q6N063 350 aa14.05□□□□□ -0.16
SYMPK-213ENST00000599460 ZC3H14Q6PJT7 736 aaKnown RBP14.05□□□□□ -0.16
SYMPK-213ENST00000599460 YTHDF1Q9BYJ9 559 aaKnown RBP14.05□□□□□ -0.16
SYMPK-213ENST00000599460 INTS6Q9UL03 887 aaKnown RBP14.05□□□□□ -0.16
SYMPK-213ENST00000599460 CCDC182A6NF36 153 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 AK1P00568 194 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 PPP3R1P63098 170 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 RNASE12Q5GAN4 147 aaKnown RBP14.04□□□□□ -0.16
SYMPK-213ENST00000599460 VRK3Q8IV63 474 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 MCATQ8IVS2 390 aaKnown RBP14.04□□□□□ -0.16
SYMPK-213ENST00000599460 DUSP23Q9BVJ7 150 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 CLEC3AO75596 197 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 GBX2P52951 348 aaPredicted RBP14.04□□□□□ -0.16
SYMPK-213ENST00000599460 RHAGQ02094 409 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 NAGSQ8N159 534 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 OR9A2Q8NGT5 310 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 ADAD1Q96M93 576 aaKnown RBP14.04□□□□□ -0.16
SYMPK-213ENST00000599460 ACTRT3Q9BYD9 372 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 ALOXE3Q9BYJ1 711 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 RNF121Q9H920 327 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 MCUBQ9NWR8 336 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 PCDHGB1Q9Y5G3 927 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 HYKKA2RU49 373 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 SOX30O94993 753 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 LHCGRP22888 699 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 CLCN2P51788 898 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 IL18R1Q13478 541 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 CDKN3Q16667 212 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 TPRG1LQ5T0D9 272 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 PDSS1Q5T2R2 415 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 FBXO27Q8NI29 283 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 FAM174AQ8TBP5 190 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 COX4I2Q96KJ9 171 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 KCNS3Q9BQ31 491 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 CRISPLD2Q9H0B8 497 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 SEC61A2Q9H9S3 476 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 FAAHO00519 579 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 ECDO95905 644 aaPredicted RBP14.04□□□□□ -0.16
SYMPK-213ENST00000599460 MNDAP41218 407 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 SLC35F1Q5T1Q4 408 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 DNM1P34Q6PK57 102 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 OR6C4Q8NGE1 309 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 OR2L8Q8NGY9 312 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 C9orf43Q8TAL5 461 aaPredicted RBP14.04□□□□□ -0.16
SYMPK-213ENST00000599460 TMEM234Q8WY98 164 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 DIRAS2Q96HU8 199 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 MCCC2Q9HCC0 563 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 BTNL2Q9UIR0 455 aa14.04□□□□□ -0.16
SYMPK-213ENST00000599460 RNASET2O00584 256 aaKnown RBP14.03□□□□□ -0.16
SYMPK-213ENST00000599460 CLIC3O95833 236 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 CDH11P55287 796 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 RPS15P62841 145 aaKnown RBP14.03□□□□□ -0.16
SYMPK-213ENST00000599460 LRIT3Q3SXY7 679 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 C1orf53Q5VUE5 145 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 KRT74Q7RTS7 529 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 DEFB123Q8N688 67 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.03□□□□□ -0.16
SYMPK-213ENST00000599460 ZBTB20Q9HC78 741 aaPredicted RBP14.03□□□□□ -0.16
SYMPK-213ENST00000599460 CENPMQ9NSP4 180 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 POT1Q9NUX5 634 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 TMEM45AQ9NWC5 275 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 NAALAD2Q9Y3Q0 740 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 TACSTD2P09758 323 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 CD36P16671 472 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 PON3Q15166 354 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 MAPK14Q16539 360 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 PEG10Q86TG7 708 aaKnown RBP14.03□□□□□ -0.16
SYMPK-213ENST00000599460 TMCO6Q96DC7 493 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 C1QTNF1Q9BXJ1 281 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 C20orf27Q9GZN8 174 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 AQP9O43315 295 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 RNF13O43567 381 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 IMPA1P29218 277 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 TPMTP51580 245 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 MLLT10P55197 1068 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 PRDX1Q06830 199 aaKnown RBP14.03□□□□□ -0.16
SYMPK-213ENST00000599460 DMPKQ09013 629 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 FAM69BQ5VUD6 431 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 TCEANCQ8N8B7 351 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 OR5L2Q8NGL0 311 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 CRELD1Q96HD1 420 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 WDR83Q9BRX9 315 aaKnown RBP14.03□□□□□ -0.16
SYMPK-213ENST00000599460 PPP4R1LQ9P1A2 415 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 GPR45Q9Y5Y3 372 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 SMCHD1A6NHR9 2005 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 MCM3APO60318 1980 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 GABRR3A8MPY1 467 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 SOX1O00570 391 aaPredicted RBP14.03□□□□□ -0.16
SYMPK-213ENST00000599460 CDC40O60508 579 aaKnown RBP eCLIP14.03□□□□□ -0.16
SYMPK-213ENST00000599460 MC3RP41968 323 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 RAB14P61106 215 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 HENMT1Q5T8I9 393 aaKnown RBP14.03□□□□□ -0.16
SYMPK-213ENST00000599460 SHQ1Q6PI26 577 aaKnown RBP14.03□□□□□ -0.16
SYMPK-213ENST00000599460 VTCN1Q7Z7D3 282 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 NETO1Q8TDF5 533 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 MAGIXQ9H6Y5 334 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 MYNNQ9NPC7 610 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 DNAJC27Q9NZQ0 273 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 ZNF451Q9Y4E5 1061 aa14.03□□□□□ -0.16
SYMPK-213ENST00000599460 PRKAR1AP10644 381 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms