RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 SETDB1Q15047 1291 aa16.09■□□□□ 0.17
HOMER3-210ENST00000599097 ACAP2Q15057 778 aa16.09■□□□□ 0.17
HOMER3-210ENST00000599097 TMEM198Q66K66 360 aa16.09■□□□□ 0.17
HOMER3-210ENST00000599097 OR52E8Q6IFG1 317 aa16.09■□□□□ 0.17
HOMER3-210ENST00000599097 CCDC25Q86WR0 208 aa16.09■□□□□ 0.17
HOMER3-210ENST00000599097 PM20D2Q8IYS1 436 aa16.09■□□□□ 0.17
HOMER3-210ENST00000599097 LRRC25Q8N386 305 aaPredicted RBP16.09■□□□□ 0.17
HOMER3-210ENST00000599097 RPRMLQ8N4K4 120 aa16.09■□□□□ 0.17
HOMER3-210ENST00000599097 SPATA4Q8NEY3 305 aa16.09■□□□□ 0.17
HOMER3-210ENST00000599097 NEIL3Q8TAT5 605 aa16.09■□□□□ 0.17
HOMER3-210ENST00000599097 DTNBP1Q96EV8 351 aa16.09■□□□□ 0.17
HOMER3-210ENST00000599097 SECISBP2Q96T21 854 aaKnown RBP16.09■□□□□ 0.17
HOMER3-210ENST00000599097 MTERF1Q99551 399 aaKnown RBP16.09■□□□□ 0.17
HOMER3-210ENST00000599097 WWTR1Q9GZV5 400 aa16.09■□□□□ 0.17
HOMER3-210ENST00000599097 ALKBH4Q9NXW9 302 aa16.09■□□□□ 0.17
HOMER3-210ENST00000599097 TMCO1Q9UM00 188 aa16.09■□□□□ 0.17
HOMER3-210ENST00000599097 FAM215AQ9Y5M1 114 aa16.09■□□□□ 0.17
HOMER3-210ENST00000599097 LIPGQ9Y5X9 500 aa16.09■□□□□ 0.17
HOMER3-210ENST00000599097 ANKHD1Q8IWZ3 2542 aaKnown RBP16.08■□□□□ 0.17
HOMER3-210ENST00000599097 FOXE1O00358 373 aaPredicted RBP16.08■□□□□ 0.16
HOMER3-210ENST00000599097 PLPP1O14494 284 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 PROM1O43490 865 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 SH3BGRLO75368 114 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 SEMA3DO95025 777 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 SNX4O95219 450 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 SLC35E2P0CK97 266 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 PIGAP37287 484 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 ART1P52961 327 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 PLTPP55058 493 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 HERVK_113P63132 956 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 ERVK-8P63133 956 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 ZNF267Q14586 743 aaPredicted RBP16.08■□□□□ 0.16
HOMER3-210ENST00000599097 RPS6KA2Q15349 733 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 PAGE2Q7Z2X7 111 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 WDR53Q7Z5U6 358 aaPredicted RBP16.08■□□□□ 0.16
HOMER3-210ENST00000599097 CMC1Q7Z7K0 106 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 OR4N5Q8IXE1 308 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 SREK1Q8WXA9 508 aaKnown RBP16.08■□□□□ 0.16
HOMER3-210ENST00000599097 TP53INP1Q96A56 240 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 HSPBAP1Q96EW2 488 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 SERPINI1Q99574 410 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 ERVK-6Q9BXR3 956 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 DDX31Q9H8H2 851 aaKnown RBP16.08■□□□□ 0.16
HOMER3-210ENST00000599097 SH2D2AQ9NP31 389 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 AHSPQ9NZD4 102 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 MTRF1LQ9UGC7 380 aaKnown RBP16.08■□□□□ 0.16
HOMER3-210ENST00000599097 ERVK-19Q9WJR5 959 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 SPG11Q96JI7 2443 aa16.08■□□□□ 0.16
HOMER3-210ENST00000599097 A0A0G2JNJ9 132 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 C2orf92A0A1B0GVN3 265 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 AHRRA9YTQ3 701 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 RAD51CO43502 376 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 GUCY1B2O75343 617 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 FAM58BPP0C7Q3 252 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 KRT15P19012 456 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 GDF1P27539 372 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 PIK3R1P27986 724 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 PHBP35232 272 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 ARL1P40616 181 aaPredicted RBP16.07■□□□□ 0.16
HOMER3-210ENST00000599097 MAGEA4P43358 317 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 SLC37A1P57057 533 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 EBPQ15125 230 aaKnown RBP16.07■□□□□ 0.16
HOMER3-210ENST00000599097 NTRK2Q16620 822 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 PFKFB4Q16877 469 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 PRAMEF20Q5VT98 475 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 ARSKQ6UWY0 536 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 PACS2Q86VP3 889 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 GALNT12Q8IXK2 581 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 FBF1Q8TES7 1133 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 JSRP1Q96MG2 331 aaPredicted RBP16.07■□□□□ 0.16
HOMER3-210ENST00000599097 IGSF5Q9NSI5 407 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 GRHL1Q9NZI5 618 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 Q9UFV3 132 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 CFL2Q9Y281 166 aa16.07■□□□□ 0.16
HOMER3-210ENST00000599097 CHCHD2Q9Y6H1 151 aaPredicted RBP16.07■□□□□ 0.16
HOMER3-210ENST00000599097 SETD2Q9BYW2 2564 aaPredicted RBP16.06■□□□□ 0.16
HOMER3-210ENST00000599097 MTORP42345 2549 aa16.06■□□□□ 0.16
HOMER3-210ENST00000599097 FAM221AA4D161 298 aa16.06■□□□□ 0.16
HOMER3-210ENST00000599097 NADKO95544 446 aaPredicted RBP16.06■□□□□ 0.16
HOMER3-210ENST00000599097 KIR2DL3P43628 341 aa16.06■□□□□ 0.16
HOMER3-210ENST00000599097 MASP1P48740 699 aa16.06■□□□□ 0.16
HOMER3-210ENST00000599097 SERPINB8P50452 374 aa16.06■□□□□ 0.16
HOMER3-210ENST00000599097 ASCL1P50553 236 aa16.06■□□□□ 0.16
HOMER3-210ENST00000599097 HNRNPH2P55795 449 aaKnown RBP16.06■□□□□ 0.16
HOMER3-210ENST00000599097 GPX6P59796 221 aa16.06■□□□□ 0.16
HOMER3-210ENST00000599097 RPS13P62277 151 aaKnown RBP16.06■□□□□ 0.16
HOMER3-210ENST00000599097 PCBP2Q15366 365 aaKnown RBP eCLIP16.06■□□□□ 0.16
HOMER3-210ENST00000599097 TAOK1Q7L7X3 1001 aa16.06■□□□□ 0.16
HOMER3-210ENST00000599097 LACC1Q8IV20 430 aa16.06■□□□□ 0.16
HOMER3-210ENST00000599097 ULK2Q8IYT8 1036 aa16.06■□□□□ 0.16
HOMER3-210ENST00000599097 C17orf47Q8NEP4 570 aa16.06■□□□□ 0.16
HOMER3-210ENST00000599097 DIO2Q92813 273 aa16.06■□□□□ 0.16
HOMER3-210ENST00000599097 ATP6V1E2Q96A05 226 aa16.06■□□□□ 0.16
HOMER3-210ENST00000599097 PPWD1Q96BP3 646 aaKnown RBP16.06■□□□□ 0.16
HOMER3-210ENST00000599097 IPPKQ9H8X2 491 aa16.06■□□□□ 0.16
HOMER3-210ENST00000599097 DNAJB12Q9NXW2 375 aaKnown RBP16.06■□□□□ 0.16
HOMER3-210ENST00000599097 L3MBTL1Q9Y468 752 aa16.06■□□□□ 0.16
HOMER3-210ENST00000599097 IKBKGQ9Y6K9 419 aa16.06■□□□□ 0.16
HOMER3-210ENST00000599097 MED13LQ71F56 2210 aa16.06■□□□□ 0.16
HOMER3-210ENST00000599097 A0A0A6YYD5 115 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms