RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 C3orf30Q96M34 536 aa13.94□□□□□ -0.18
SCN1B-204ENST00000596348 SH3GL2Q99962 352 aa13.94□□□□□ -0.18
SCN1B-204ENST00000596348 FAIM2Q9BWQ8 316 aa13.94□□□□□ -0.18
SCN1B-204ENST00000596348 ILKAPQ9H0C8 392 aaPredicted RBP13.94□□□□□ -0.18
SCN1B-204ENST00000596348 LRTM1Q9HBL6 345 aa13.94□□□□□ -0.18
SCN1B-204ENST00000596348 C1orf109Q9NX04 203 aa13.94□□□□□ -0.18
SCN1B-204ENST00000596348 GIMAP2Q9UG22 337 aa13.94□□□□□ -0.18
SCN1B-204ENST00000596348 PCDHGA10Q9Y5H3 936 aa13.94□□□□□ -0.18
SCN1B-204ENST00000596348 BAHCC1Q9P281 2608 aa13.94□□□□□ -0.18
SCN1B-204ENST00000596348 RELNP78509 3460 aa13.94□□□□□ -0.18
SCN1B-204ENST00000596348 LRRK2Q5S007 2527 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 OR5H15A6NDH6 313 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 GABRR3A8MPY1 467 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 LSM1O15116 133 aaKnown RBP13.93□□□□□ -0.18
SCN1B-204ENST00000596348 RGS14O43566 566 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 SEC22BO75396 215 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 SKAP2O75563 359 aaPredicted RBP13.93□□□□□ -0.18
SCN1B-204ENST00000596348 SASH3O75995 380 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 CLPSP04118 112 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 JUNP05412 331 aaKnown RBP13.93□□□□□ -0.18
SCN1B-204ENST00000596348 CT62P0C5K7 136 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 GRK2P25098 689 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 TACR1P25103 407 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 PTGER1P34995 402 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 FEN1P39748 380 aaKnown RBP13.93□□□□□ -0.18
SCN1B-204ENST00000596348 SLC1A6P48664 564 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 ERVK-8P63133 956 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 BST1Q10588 318 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 TUBA3CQ13748 450 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 ZNF169Q14929 603 aaPredicted RBP13.93□□□□□ -0.18
SCN1B-204ENST00000596348 TLR1Q15399 786 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 PRSS53Q2L4Q9 553 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 SPRED3Q2MJR0 410 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 TUBA3EQ6PEY2 450 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 ZNF781Q8N8C0 355 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 C7orf57Q8NEG2 295 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 CDC26Q8NHZ8 85 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 FAM76AQ8TAV0 307 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 KLHL29Q96CT2 875 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 CNRIP1Q96F85 164 aaPredicted RBP13.93□□□□□ -0.18
SCN1B-204ENST00000596348 FBXL20Q96IG2 436 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 METTL2AQ96IZ6 378 aaKnown RBP13.93□□□□□ -0.18
SCN1B-204ENST00000596348 ATP6V1G3Q96LB4 118 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 ZNF681Q96N22 645 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 PELOQ9BRX2 385 aaKnown RBP13.93□□□□□ -0.18
SCN1B-204ENST00000596348 VIPAS39Q9H9C1 493 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 LIN28AQ9H9Z2 209 aaKnown RBP13.93□□□□□ -0.18
SCN1B-204ENST00000596348 CXorf21Q9HAI6 301 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 MYNNQ9NPC7 610 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 SLAMF7Q9NQ25 335 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 ANKRD10Q9NXR5 420 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 EXO1Q9UQ84 846 aaKnown RBP13.93□□□□□ -0.18
SCN1B-204ENST00000596348 ERVK-19Q9WJR5 959 aa13.93□□□□□ -0.18
SCN1B-204ENST00000596348 POLEQ07864 2286 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 TTLL8A6PVC2 850 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 ERAL1O75616 437 aaKnown RBP13.92□□□□□ -0.18
SCN1B-204ENST00000596348 ZFAND5O76080 213 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 DRD2P14416 443 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 PORP16435 677 aaPredicted RBP13.92□□□□□ -0.18
SCN1B-204ENST00000596348 GALNSP34059 522 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 SOX18P35713 384 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 CD96P40200 585 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 RPL38P63173 70 aaKnown RBP13.92□□□□□ -0.18
SCN1B-204ENST00000596348 ZNF267Q14586 743 aaPredicted RBP13.92□□□□□ -0.18
SCN1B-204ENST00000596348 RFTN2Q52LD8 501 aaPredicted RBP13.92□□□□□ -0.18
SCN1B-204ENST00000596348 FAM71E1Q6IPT2 247 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 HSDL2Q6YN16 418 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 ZNF227Q86WZ6 799 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 C9orf40Q8IXQ3 194 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 RIT1Q92963 219 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 EGLN2Q96KS0 407 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 SIGLEC12Q96PQ1 595 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 CNPPD1Q9BV87 410 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 NKIRAS1Q9NYS0 192 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 HAO1Q9UJM8 370 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 UTS2RQ9UKP6 389 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 NTNG1Q9Y2I2 539 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 RAP2CQ9Y3L5 183 aa13.92□□□□□ -0.18
SCN1B-204ENST00000596348 USP9XQ93008 2570 aaPredicted RBP13.91□□□□□ -0.18
SCN1B-204ENST00000596348 HIVEP3Q5T1R4 2406 aa13.91□□□□□ -0.18
SCN1B-204ENST00000596348 ATP6AP2A0A1C7CYW4 349 aa13.91□□□□□ -0.18
SCN1B-204ENST00000596348 ITGA10O75578 1167 aa13.91□□□□□ -0.18
SCN1B-204ENST00000596348 ATP6AP2O75787 350 aa13.91□□□□□ -0.18
SCN1B-204ENST00000596348 SDC1P18827 310 aa13.91□□□□□ -0.18
SCN1B-204ENST00000596348 DDCP20711 480 aa13.91□□□□□ -0.18
SCN1B-204ENST00000596348 SSTR4P31391 388 aa13.91□□□□□ -0.18
SCN1B-204ENST00000596348 HK2P52789 917 aa13.91□□□□□ -0.18
SCN1B-204ENST00000596348 RNF4P78317 190 aa13.91□□□□□ -0.18
SCN1B-204ENST00000596348 MGAT2Q10469 447 aa13.91□□□□□ -0.18
SCN1B-204ENST00000596348 STX3Q13277 289 aa13.91□□□□□ -0.18
SCN1B-204ENST00000596348 LTB4RQ15722 352 aa13.91□□□□□ -0.18
SCN1B-204ENST00000596348 INPP5JQ15735 1006 aaPredicted RBP13.91□□□□□ -0.18
SCN1B-204ENST00000596348 GALNTL6Q49A17 601 aa13.91□□□□□ -0.18
SCN1B-204ENST00000596348 GALNT12Q8IXK2 581 aa13.91□□□□□ -0.18
SCN1B-204ENST00000596348 MDS2Q8NDY4 140 aa13.91□□□□□ -0.18
SCN1B-204ENST00000596348 EXOSC8Q96B26 276 aaKnown RBP13.91□□□□□ -0.18
SCN1B-204ENST00000596348 C19orf60Q96EN9 201 aa13.91□□□□□ -0.18
SCN1B-204ENST00000596348 CCT7Q99832 543 aa13.91□□□□□ -0.18
SCN1B-204ENST00000596348 UTP23Q9BRU9 249 aaKnown RBP13.91□□□□□ -0.18
SCN1B-204ENST00000596348 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms