RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 C10orf82Q8WW14 230 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 DAZLQ92904 295 aaKnown RBP18.03■□□□□ 0.48
PNKP-207ENST00000596014 CNRIP1Q96F85 164 aaPredicted RBP18.03■□□□□ 0.48
PNKP-207ENST00000596014 PELOQ9BRX2 385 aaKnown RBP18.03■□□□□ 0.48
PNKP-207ENST00000596014 LHPPQ9H008 270 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 MMP25Q9NPA2 562 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 MIEF1Q9NQG6 463 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 PPIEQ9UNP9 301 aaKnown RBP18.03■□□□□ 0.48
PNKP-207ENST00000596014 EIF3LQ9Y262 564 aaKnown RBP18.03■□□□□ 0.48
PNKP-207ENST00000596014 USH1CQ9Y6N9 552 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 ZNF780BQ9Y6R6 833 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 GOLGA8QA0A0J9YX86 632 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 GOLGA8OA6NCC3 632 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 C17orf105B2RV13 164 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 GOLGA8NF8WBI6 632 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 MKRN2OSH3BPM6 223 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 OR10H2O60403 315 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 PRPS2P11908 318 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 COX7A2P14406 83 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 PORP16435 677 aaPredicted RBP18.03■□□□□ 0.48
PNKP-207ENST00000596014 LBPP18428 481 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 FEN1P39748 380 aaKnown RBP18.03■□□□□ 0.48
PNKP-207ENST00000596014 ASMTP46597 345 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 GPR143P51810 404 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 AP2B1P63010 937 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 ERVK-8P63133 956 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 TICAM1Q8IUC6 712 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 EXD3Q8N9H8 876 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 OR14A16Q8NHC5 309 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 PSMF1Q92530 271 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 GFM2Q969S9 779 aaKnown RBP18.03■□□□□ 0.48
PNKP-207ENST00000596014 ABHD17AQ96GS6 310 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 ZNF681Q96N22 645 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 SLC25A23Q9BV35 468 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 NUDT9Q9BW91 350 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 ADNPQ9H2P0 1102 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 ASIC5Q9NY37 505 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 GPR83Q9NYM4 423 aa18.03■□□□□ 0.48
PNKP-207ENST00000596014 NOP53Q9NZM5 478 aaKnown RBP18.03■□□□□ 0.48
PNKP-207ENST00000596014 TNRC6AQ8NDV7 1962 aaKnown RBP18.02■□□□□ 0.48
PNKP-207ENST00000596014 LRATO95237 230 aa18.02■□□□□ 0.47
PNKP-207ENST00000596014 TROVE2P10155 538 aaKnown RBP eCLIP18.02■□□□□ 0.47
PNKP-207ENST00000596014 ITGAMP11215 1152 aa18.02■□□□□ 0.47
PNKP-207ENST00000596014 CSNK2A2P19784 350 aaPredicted RBP18.02■□□□□ 0.47
PNKP-207ENST00000596014 KCNAB2Q13303 367 aa18.02■□□□□ 0.47
PNKP-207ENST00000596014 PTGR1Q14914 329 aa18.02■□□□□ 0.47
PNKP-207ENST00000596014 PRSS53Q2L4Q9 553 aa18.02■□□□□ 0.47
PNKP-207ENST00000596014 SLC9B1Q4ZJI4 515 aa18.02■□□□□ 0.47
PNKP-207ENST00000596014 IRAK1BP1Q5VVH5 260 aa18.02■□□□□ 0.47
PNKP-207ENST00000596014 JMJD6Q6NYC1 403 aaPredicted RBP18.02■□□□□ 0.47
PNKP-207ENST00000596014 C10orf67Q8IYJ2 551 aa18.02■□□□□ 0.47
PNKP-207ENST00000596014 MORN4Q8NDC4 146 aa18.02■□□□□ 0.47
PNKP-207ENST00000596014 BRIX1Q8TDN6 353 aaKnown RBP18.02■□□□□ 0.47
PNKP-207ENST00000596014 ELP5Q8TE02 316 aa18.02■□□□□ 0.47
PNKP-207ENST00000596014 RIT1Q92963 219 aa18.02■□□□□ 0.47
PNKP-207ENST00000596014 EXOSC8Q96B26 276 aaKnown RBP18.02■□□□□ 0.47
PNKP-207ENST00000596014 THOC1Q96FV9 657 aaKnown RBP18.02■□□□□ 0.47
PNKP-207ENST00000596014 WBP1Q96G27 269 aa18.02■□□□□ 0.47
PNKP-207ENST00000596014 MAELQ96JY0 434 aaKnown RBP18.02■□□□□ 0.47
PNKP-207ENST00000596014 ZNF552Q9H707 407 aaPredicted RBP18.02■□□□□ 0.47
PNKP-207ENST00000596014 SLC35C2Q9NQQ7 365 aa18.02■□□□□ 0.47
PNKP-207ENST00000596014 TAS2R7Q9NYW3 318 aa18.02■□□□□ 0.47
PNKP-207ENST00000596014 TUBD1Q9UJT1 453 aa18.02■□□□□ 0.47
PNKP-207ENST00000596014 PCDHGA9Q9Y5G4 932 aaKnown RBP18.02■□□□□ 0.47
PNKP-207ENST00000596014 BSNQ9UPA5 3926 aa18.01■□□□□ 0.47
PNKP-207ENST00000596014 AKAP10O43572 662 aa18.01■□□□□ 0.47
PNKP-207ENST00000596014 G6PDP11413 515 aa18.01■□□□□ 0.47
PNKP-207ENST00000596014 GALNSP34059 522 aa18.01■□□□□ 0.47
PNKP-207ENST00000596014 DIO3P55073 304 aa18.01■□□□□ 0.47
PNKP-207ENST00000596014 OGFOD2Q6N063 350 aa18.01■□□□□ 0.47
PNKP-207ENST00000596014 EPGNQ6UW88 154 aa18.01■□□□□ 0.47
PNKP-207ENST00000596014 APCDD1LQ8NCL9 501 aa18.01■□□□□ 0.47
PNKP-207ENST00000596014 UBL7Q96S82 380 aaPredicted RBP18.01■□□□□ 0.47
PNKP-207ENST00000596014 REEP4Q9H6H4 257 aa18.01■□□□□ 0.47
PNKP-207ENST00000596014 NPHS2Q9NP85 383 aa18.01■□□□□ 0.47
PNKP-207ENST00000596014 G3BP2Q9UN86 482 aaKnown RBP18.01■□□□□ 0.47
PNKP-207ENST00000596014 FAM208BQ5VWN6 2430 aa18.01■□□□□ 0.47
PNKP-207ENST00000596014 UBOX5O94941 541 aa18■□□□□ 0.47
PNKP-207ENST00000596014 TGDSO95455 350 aa18■□□□□ 0.47
PNKP-207ENST00000596014 DDAH2O95865 285 aa18■□□□□ 0.47
PNKP-207ENST00000596014 PGDP52209 483 aa18■□□□□ 0.47
PNKP-207ENST00000596014 DUSP2Q05923 314 aa18■□□□□ 0.47
PNKP-207ENST00000596014 SAMD14Q8IZD0 417 aaPredicted RBP18■□□□□ 0.47
PNKP-207ENST00000596014 KIF2BQ8N4N8 673 aa18■□□□□ 0.47
PNKP-207ENST00000596014 OR1N1Q8NGS0 311 aa18■□□□□ 0.47
PNKP-207ENST00000596014 SLC2A12Q8TD20 617 aa18■□□□□ 0.47
PNKP-207ENST00000596014 ACTRT2Q8TDY3 377 aa18■□□□□ 0.47
PNKP-207ENST00000596014 DOK4Q8TEW6 326 aa18■□□□□ 0.47
PNKP-207ENST00000596014 NCLNQ969V3 563 aa18■□□□□ 0.47
PNKP-207ENST00000596014 VMP1Q96GC9 406 aa18■□□□□ 0.47
PNKP-207ENST00000596014 SENP5Q96HI0 755 aaPredicted RBP18■□□□□ 0.47
PNKP-207ENST00000596014 OR8D2Q9GZM6 311 aa18■□□□□ 0.47
PNKP-207ENST00000596014 CXorf21Q9HAI6 301 aa18■□□□□ 0.47
PNKP-207ENST00000596014 KCNK13Q9HB14 408 aa18■□□□□ 0.47
PNKP-207ENST00000596014 GIMAP4Q9NUV9 329 aa18■□□□□ 0.47
PNKP-207ENST00000596014 DYRK3O43781 588 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 KLHL41O60662 606 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 DIAPH2O60879 1101 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 ATP1B1P05026 303 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 NT5EP21589 574 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms