RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 E9PBE3 544 aa18.42■□□□□ 0.54
LSM4-203ENST00000593829 ATXN7O15265 892 aaPredicted RBP18.42■□□□□ 0.54
LSM4-203ENST00000593829 NPHS1O60500 1241 aa18.42■□□□□ 0.54
LSM4-203ENST00000593829 KLHL41O60662 606 aa18.42■□□□□ 0.54
LSM4-203ENST00000593829 PRMT3O60678 531 aa18.42■□□□□ 0.54
LSM4-203ENST00000593829 CRCPO75575 148 aa18.42■□□□□ 0.54
LSM4-203ENST00000593829 PGM3O95394 542 aa18.42■□□□□ 0.54
LSM4-203ENST00000593829 HSD3B1P14060 373 aa18.42■□□□□ 0.54
LSM4-203ENST00000593829 HSD3B2P26439 372 aa18.42■□□□□ 0.54
LSM4-203ENST00000593829 FLOT2Q14254 428 aa18.42■□□□□ 0.54
LSM4-203ENST00000593829 NADK2Q4G0N4 442 aa18.42■□□□□ 0.54
LSM4-203ENST00000593829 FAM219BQ5XKK7 198 aa18.42■□□□□ 0.54
LSM4-203ENST00000593829 ZCCHC7Q8N3Z6 543 aaKnown RBP18.42■□□□□ 0.54
LSM4-203ENST00000593829 CLEC1AQ8NC01 280 aa18.42■□□□□ 0.54
LSM4-203ENST00000593829 LSM14AQ8ND56 463 aaKnown RBP18.42■□□□□ 0.54
LSM4-203ENST00000593829 OR52B2Q96RD2 323 aa18.42■□□□□ 0.54
LSM4-203ENST00000593829 ADNPQ9H2P0 1102 aa18.42■□□□□ 0.54
LSM4-203ENST00000593829 C19orf25Q9UFG5 118 aaPredicted RBP18.42■□□□□ 0.54
LSM4-203ENST00000593829 MRPS33Q9Y291 106 aaKnown RBP18.42■□□□□ 0.54
LSM4-203ENST00000593829 SPACA6W5XKT8 324 aa18.42■□□□□ 0.54
LSM4-203ENST00000593829 ATMQ13315 3056 aa18.42■□□□□ 0.54
LSM4-203ENST00000593829 LOC102723996A0A087X1L8 192 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 BCAS2O75934 225 aaPredicted RBP18.41■□□□□ 0.54
LSM4-203ENST00000593829 DNAJB5O75953 348 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 FAM58BPP0C7Q3 252 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 BSGP35613 385 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 NUDT2P50583 147 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 CCL11P51671 97 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 NR1H2P55055 460 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 MYBPC1Q00872 1141 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 CSTF3Q12996 717 aaKnown RBP18.41■□□□□ 0.54
LSM4-203ENST00000593829 SLAMF1Q13291 335 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 ABRAXAS2Q15018 415 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 NSDHLQ15738 373 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 QSOX2Q6ZRP7 698 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 METTL25Q8N6Q8 603 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 PTCHD1Q96NR3 888 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 HBEGFQ99075 208 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 MAPKAP1Q9BPZ7 522 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 ZNF717Q9BY31 904 aaPredicted RBP18.41■□□□□ 0.54
LSM4-203ENST00000593829 DDX31Q9H8H2 851 aaKnown RBP18.41■□□□□ 0.54
LSM4-203ENST00000593829 KCMF1Q9P0J7 381 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 A0A1W2PQ72 361 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 FOXA1P55317 472 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 EEF1A2Q05639 463 aaKnown RBP18.41■□□□□ 0.54
LSM4-203ENST00000593829 KCNAB2Q13303 367 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 CYLC2Q14093 348 aaPredicted RBP18.41■□□□□ 0.54
LSM4-203ENST00000593829 NDUFAF7Q7L592 441 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 NUDT13Q86X67 352 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 SNX32Q86XE0 403 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 EXD3Q8N9H8 876 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 MRPL1Q9BYD6 325 aaKnown RBP18.41■□□□□ 0.54
LSM4-203ENST00000593829 ATP13A2Q9NQ11 1180 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 PRDM9Q9NQV7 894 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 TUBD1Q9UJT1 453 aa18.41■□□□□ 0.54
LSM4-203ENST00000593829 CYR61O00622 381 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 CLDN4O14493 209 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 EEDO75530 441 aaKnown RBP18.4■□□□□ 0.54
LSM4-203ENST00000593829 HPP00738 406 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 UROSP10746 265 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 COX6A1P12074 109 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 ME2P23368 584 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 SERPINB5P36952 375 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 BTG2P78543 158 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 GALNT1Q10472 559 aaPredicted RBP18.4■□□□□ 0.54
LSM4-203ENST00000593829 AIMP2Q13155 320 aaKnown RBP18.4■□□□□ 0.54
LSM4-203ENST00000593829 CYP20A1Q6UW02 462 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 LANCL3Q6ZV70 420 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 PAGE2Q7Z2X7 111 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 CPEB2Q7Z5Q1 589 aaKnown RBP18.4■□□□□ 0.54
LSM4-203ENST00000593829 ANKRD37Q7Z713 158 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 CUZD1Q86UP6 607 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 EFCAB3Q8N7B9 438 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 FAM47BQ8NA70 645 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 TSLPQ969D9 159 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 GFM2Q969S9 779 aaKnown RBP18.4■□□□□ 0.54
LSM4-203ENST00000593829 EML4Q9HC35 981 aaKnown RBP18.4■□□□□ 0.54
LSM4-203ENST00000593829 TNFRSF12AQ9NP84 129 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 MS4A12Q9NXJ0 267 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 VPS29Q9UBQ0 182 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 FBXW2Q9UKT8 454 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 MMACHCQ9Y4U1 282 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 NUP210LQ5VU65 1888 aa18.4■□□□□ 0.54
LSM4-203ENST00000593829 IGHV1-45A0A0A0MS14 117 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 NSG1A0A0A6YYJ2 146 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 MKRN2OSH3BPM6 223 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 AIM2O14862 343 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 SFTPCP11686 197 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 RANBP1P43487 201 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 HTR6P50406 440 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 RPL14P50914 215 aaKnown RBP18.39■□□□□ 0.53
LSM4-203ENST00000593829 HSD17B7P56937 341 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 HPCAP84074 193 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 LY6DQ14210 128 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 ARL13AQ5H913 290 aaPredicted RBP18.39■□□□□ 0.53
LSM4-203ENST00000593829 GPR180Q86V85 440 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 ZNF595Q8IYB9 648 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 METTL4Q8N3J2 472 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 PPP1R14BQ96C90 147 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 CDRT15Q96T59 188 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms