RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 OGFOD2Q6N063 350 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 ANKRD26P1Q6NSI1 321 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 H3F3CQ6NXT2 135 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 JMJD6Q6NYC1 403 aaPredicted RBP9.27□□□□□ -0.93
TPM4-216ENST00000592822 EPGNQ6UW88 154 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 LRRC34Q8IZ02 419 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 SIRT6Q8N6T7 355 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 ZNF321PQ8N8H1 164 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 MORN4Q8NDC4 146 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 SLC2A12Q8TD20 617 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 BRIX1Q8TDN6 353 aaKnown RBP9.27□□□□□ -0.93
TPM4-216ENST00000592822 ELP5Q8TE02 316 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 DAZLQ92904 295 aaKnown RBP9.27□□□□□ -0.93
TPM4-216ENST00000592822 RIT1Q92963 219 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 NCLNQ969V3 563 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 EXOSC8Q96B26 276 aaKnown RBP9.27□□□□□ -0.93
TPM4-216ENST00000592822 MAELQ96JY0 434 aaKnown RBP9.27□□□□□ -0.93
TPM4-216ENST00000592822 OR52B2Q96RD2 323 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 SMAD5Q99717 465 aaKnown RBP9.27□□□□□ -0.93
TPM4-216ENST00000592822 PELOQ9BRX2 385 aaKnown RBP9.27□□□□□ -0.93
TPM4-216ENST00000592822 SLC25A23Q9BV35 468 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 REEP4Q9H6H4 257 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 ZNF552Q9H707 407 aaPredicted RBP9.27□□□□□ -0.93
TPM4-216ENST00000592822 CXorf21Q9HAI6 301 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 KCNK13Q9HB14 408 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 MIEF1Q9NQG6 463 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 SLC35C2Q9NQQ7 365 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 NOP53Q9NZM5 478 aaKnown RBP9.27□□□□□ -0.93
TPM4-216ENST00000592822 TUBD1Q9UJT1 453 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 EIF3LQ9Y262 564 aaKnown RBP9.27□□□□□ -0.93
TPM4-216ENST00000592822 ZNF780BQ9Y6R6 833 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 KALRNO60229 2985 aa9.27□□□□□ -0.93
TPM4-216ENST00000592822 TRBV11-1A0A0K0K1C0 115 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 GABRR3A8MPY1 467 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 A8MUI8 341 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 MYO1GB0I1T2 1018 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 ATXN7O15265 892 aaPredicted RBP9.26□□□□□ -0.93
TPM4-216ENST00000592822 TBX19O60806 448 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 DIAPH2O60879 1101 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 TGDSO95455 350 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 IGKV3-11P04433 115 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 ATP1B1P05026 303 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 ALDOCP09972 364 aaKnown RBP9.26□□□□□ -0.93
TPM4-216ENST00000592822 CT62P0C5K7 136 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 COX7A2P14406 83 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 NT5EP21589 574 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 SOX18P35713 384 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 SOX11P35716 441 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 MDH1P40925 334 aaKnown RBP9.26□□□□□ -0.93
TPM4-216ENST00000592822 IDH3AP50213 366 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 PGDP52209 483 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 AP2B1P63010 937 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 PDE7AQ13946 482 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 LTB4RQ15722 352 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 CEBPEQ15744 281 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 MPEG1Q2M385 716 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 SPRED3Q2MJR0 410 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 ZNF385BQ569K4 471 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 AGAP7PQ5VUJ5 663 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 IRAK1BP1Q5VVH5 260 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 B3GNTL1Q67FW5 361 aaPredicted RBP9.26□□□□□ -0.93
TPM4-216ENST00000592822 FCRLBQ6BAA4 426 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 SPATA19Q7Z5L4 167 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 RIMKLAQ8IXN7 391 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 CCDC116Q8IYX3 515 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 KRTCAP2Q8N6L1 136 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 OR1N1Q8NGS0 311 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 C9orf43Q8TAL5 461 aaPredicted RBP9.26□□□□□ -0.93
TPM4-216ENST00000592822 SUN3Q8TAQ9 357 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 ACTRT2Q8TDY3 377 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 ZNF721Q8TF20 911 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 NUDT8Q8WV74 236 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 PPCDCQ96CD2 204 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 VMP1Q96GC9 406 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 ZNF764Q96H86 408 aaPredicted RBP9.26□□□□□ -0.93
TPM4-216ENST00000592822 SENP5Q96HI0 755 aaPredicted RBP9.26□□□□□ -0.93
TPM4-216ENST00000592822 FBXL20Q96IG2 436 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 AGAP4Q96P64 663 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 BBC3Q96PG8 261 aaPredicted RBP9.26□□□□□ -0.93
TPM4-216ENST00000592822 NPAS2Q99743 824 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 SEMA4CQ9C0C4 833 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 OR8D2Q9GZM6 311 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 CCDC134Q9H6E4 229 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 ZBTB20Q9HC78 741 aaPredicted RBP9.26□□□□□ -0.93
TPM4-216ENST00000592822 ZNF71Q9NQZ8 489 aaPredicted RBP9.26□□□□□ -0.93
TPM4-216ENST00000592822 PTGFRNQ9P2B2 879 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 ATP6V1HQ9UI12 483 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 TP53TG5Q9Y2B4 290 aa9.26□□□□□ -0.93
TPM4-216ENST00000592822 ANKRD28O15084 1053 aa9.25□□□□□ -0.93
TPM4-216ENST00000592822 SCAMP2O15127 329 aaKnown RBP9.25□□□□□ -0.93
TPM4-216ENST00000592822 PRKNO60260 465 aaPredicted RBP9.25□□□□□ -0.93
TPM4-216ENST00000592822 MAN1A2O60476 641 aa9.25□□□□□ -0.93
TPM4-216ENST00000592822 CLPSP04118 112 aa9.25□□□□□ -0.93
TPM4-216ENST00000592822 PRPS1L1P21108 318 aa9.25□□□□□ -0.93
TPM4-216ENST00000592822 S1PR1P21453 382 aa9.25□□□□□ -0.93
TPM4-216ENST00000592822 HPCAL1P37235 193 aa9.25□□□□□ -0.93
TPM4-216ENST00000592822 CLCN2P51788 898 aa9.25□□□□□ -0.93
TPM4-216ENST00000592822 AQP5P55064 265 aa9.25□□□□□ -0.93
TPM4-216ENST00000592822 CLDN8P56748 225 aa9.25□□□□□ -0.93
TPM4-216ENST00000592822 C21orf58P58505 322 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms