RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 FOXJ1Q92949 421 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 IKZF5Q9H5V7 419 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 PPT2Q9UMR5 302 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 A0A1W2PQ72 361 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 M0R3H8 397 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 B3GALT4O96024 378 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 PPP2R2BQ00005 443 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 UNC5DQ6UXZ4 953 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 POMGNT2Q8NAT1 580 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 SGCDQ92629 289 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 CLCA3PQ9Y6N3 262 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 GBX2P52951 348 aaPredicted RBP16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 MAB21L1Q13394 359 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 DHCR24Q15392 516 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 NUP43Q8NFH3 380 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 NARS2Q96I59 477 aaKnown RBP16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 PCDHGB1Q9Y5G3 927 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 IRAK3Q9Y616 596 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 RNF144AP50876 292 aaPredicted RBP16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 ILF3Q12906 894 aaKnown RBP eCLIP16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 CST9Q5W186 159 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 ABHD13Q7L211 337 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 UBE2FQ969M7 185 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 SECISBP2Q96T21 854 aaKnown RBP16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 SLC6A16Q9GZN6 736 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 PAQR5Q9NXK6 330 aaPredicted RBP16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 ANKMY1Q9P2S6 941 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 ASPDHA6ND91 283 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 CD8B2A6NJW9 211 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 CD8BP10966 210 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 FAUP35544 74 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 GUCA1AP43080 201 aaPredicted RBP16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 AP3S2P59780 193 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 ID2Q02363 134 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 DNAJC22Q8N4W6 341 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 FANK1Q8TC84 345 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 ZNF480Q8WV37 535 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 MOAP1Q96BY2 351 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 VMP1Q96GC9 406 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 PKMYT1Q99640 499 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 IRF2BPLQ9H1B7 796 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 HCFC1R1Q9NWW0 138 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 ASIC5Q9NY37 505 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 MARK1Q9P0L2 795 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 SCN2BO60939 215 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 TBC1D25Q3MII6 688 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 SLC22A18Q96BI1 424 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 METTL2AQ96IZ6 378 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 MYNNQ9NPC7 610 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 ZDHHC4Q9NPG8 344 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 IL37Q9NZH6 218 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 EXTL2Q9UBQ6 330 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 MRPL3P09001 348 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 TIMP2P16035 220 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 BMP8BP34820 402 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 SLC5A12Q1EHB4 618 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 KDM4DQ6B0I6 523 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 BMP8AQ7Z5Y6 402 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 POF1BQ8WVV4 589 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 JPH3Q8WXH2 748 aaPredicted RBP16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 TMEM246Q9BRR3 403 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 CHIAQ9BZP6 476 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 ENAMQ9NRM1 1142 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 EIF3KQ9UBQ5 218 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 ACSL5Q9ULC5 683 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 RWDD3Q9Y3V2 267 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 MAP2K3P46734 347 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 C2orf27AQ580R0 203 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 DTX3Q8N9I9 347 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 PSD4Q8NDX1 1056 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 PDCD10Q9BUL8 212 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 HDHD5Q9BXW7 423 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 TTTY10Q9BZA0 68 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 MAFFQ9ULX9 164 aa16.3■□□□□ 0.2
SMARCA4-215ENST00000590574 A0A1W2PQL4 384 aaPredicted RBP16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 TSPAN12O95859 305 aa16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 GP2P55259 537 aaKnown RBP16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 TSEN15Q8WW01 171 aaKnown RBP16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 DPF3Q92784 378 aa16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 RBM38Q9H0Z9 239 aaKnown RBP16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 CREBZFQ9NS37 354 aa16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 UCKL1Q9NWZ5 548 aa16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 FHP07954 510 aa16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 DDCP20711 480 aa16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 SLC39A11Q8N1S5 342 aa16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 SUN5Q8TC36 379 aa16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 FAM46AQ96IP4 442 aaKnown RBP16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 PSORS1C1Q9UIG5 152 aa16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 STOML2Q9UJZ1 356 aa16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 CROCCQ5TZA2 2017 aa16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 CSF2RAP15509 400 aa16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 OR2T33Q8NG76 320 aa16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 OR8K5Q8NH50 307 aa16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 WBP2Q969T9 261 aa16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 SLC46A2Q9BY10 475 aa16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 DPAGT1Q9H3H5 408 aa16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 MKKSQ9NPJ1 570 aaPredicted RBP16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 HSPB11Q9Y547 144 aa16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 AP1M2Q9Y6Q5 423 aa16.29■□□□□ 0.2
SMARCA4-215ENST00000590574 ADORA3P0DMS8 318 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms