RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 PRR7Q8TB68 274 aa16.89■□□□□ 0.29
DDX39A-212ENST00000590260 ZNF681Q96N22 645 aa16.89■□□□□ 0.29
DDX39A-212ENST00000590260 ZIM3Q96PE6 472 aa16.89■□□□□ 0.29
DDX39A-212ENST00000590260 TUBB1Q9H4B7 451 aa16.89■□□□□ 0.29
DDX39A-212ENST00000590260 CXorf21Q9HAI6 301 aa16.89■□□□□ 0.29
DDX39A-212ENST00000590260 DEPPQ9NTK1 212 aa16.89■□□□□ 0.29
DDX39A-212ENST00000590260 SIRT5Q9NXA8 310 aa16.89■□□□□ 0.29
DDX39A-212ENST00000590260 YARS2Q9Y2Z4 477 aaKnown RBP16.89■□□□□ 0.29
DDX39A-212ENST00000590260 USP9XQ93008 2570 aaPredicted RBP16.89■□□□□ 0.29
DDX39A-212ENST00000590260 C1orf226A1L170 272 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 FCHO1O14526 889 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 PCDH7O60245 1069 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 TRIM13O60858 407 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 CPMP14384 443 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 CD46P15529 392 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 SSTR4P31391 388 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 SSR4P51571 173 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 XKP51811 444 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 NAA20P61599 178 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 TRA2BP62995 288 aaKnown RBP16.88■□□□□ 0.29
DDX39A-212ENST00000590260 DUSP8Q13202 625 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 KRT71Q3SY84 523 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 ZCCHC23Q6ZST2 131 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 EXOC3L1Q86VI1 746 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 SIAH3Q8IW03 269 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 CPSF7Q8N684 471 aaKnown RBP16.88■□□□□ 0.29
DDX39A-212ENST00000590260 OR4K14Q8NGD5 310 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 OR2T11Q8NH01 316 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.88■□□□□ 0.29
DDX39A-212ENST00000590260 RIT1Q92963 219 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 CNPPD1Q9BV87 410 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 WDR41Q9HAD4 459 aa16.88■□□□□ 0.29
DDX39A-212ENST00000590260 ERRFI1Q9UJM3 462 aaPredicted RBP16.88■□□□□ 0.29
DDX39A-212ENST00000590260 EXO1Q9UQ84 846 aaKnown RBP16.88■□□□□ 0.29
DDX39A-212ENST00000590260 A0A0G2JMM0 328 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 A0A1W2PPB8 328 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 A0A1W2PRS3 328 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 PINLYPA6NC86 204 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 KIR3DP1A8MWS1 328 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 TMEM233B4DJY2 109 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 IL3P08700 152 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 COX7A2P14406 83 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 PIK3R1P27986 724 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 TIA1P31483 386 aaKnown RBP eCLIP16.87■□□□□ 0.29
DDX39A-212ENST00000590260 NR0B1P51843 470 aaKnown RBP16.87■□□□□ 0.29
DDX39A-212ENST00000590260 KCNK10P57789 538 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 BTKQ06187 659 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 FUT7Q11130 342 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 ASPHQ12797 758 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 MPP2Q14168 576 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 KIAA0040Q15053 153 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 EBPQ15125 230 aaKnown RBP16.87■□□□□ 0.29
DDX39A-212ENST00000590260 MAPKAPK3Q16644 382 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 UGT3A2Q3SY77 523 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 PIGGQ5H8A4 983 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 CFAP157Q5JU67 520 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 FAM111BQ6SJ93 734 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 IL20RBQ6UXL0 311 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 SULF2Q8IWU5 870 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 CYP4Z2PQ8N1L4 340 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 ZNF615Q8N8J6 731 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 ZNF441Q8N8Z8 693 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 TMEM178AQ8NBL3 297 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 DNAJB8Q8NHS0 232 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 C16orf78Q8WTQ4 265 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 CNRIP1Q96F85 164 aaPredicted RBP16.87■□□□□ 0.29
DDX39A-212ENST00000590260 C5orf34Q96MH7 638 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 PELOQ9BRX2 385 aaKnown RBP16.87■□□□□ 0.29
DDX39A-212ENST00000590260 EBPLQ9BY08 206 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 NMRK1Q9NWW6 199 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 DLGAP4Q9Y2H0 992 aa16.87■□□□□ 0.29
DDX39A-212ENST00000590260 ZNHIT1O43257 154 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 OR10H2O60403 315 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 UROSP10746 265 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 FEN1P39748 380 aaKnown RBP16.86■□□□□ 0.29
DDX39A-212ENST00000590260 ESPL1Q14674 2120 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 LTB4RQ15722 352 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 PRICKLE4Q2TBC4 344 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 SPIN4Q56A73 249 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 FHL5Q5TD97 284 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 KANK2Q63ZY3 851 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 Q6ZSR9 355 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 CHERPQ8IWX8 916 aaKnown RBP16.86■□□□□ 0.29
DDX39A-212ENST00000590260 TMEM156Q8N614 296 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 C7orf57Q8NEG2 295 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 NUBPLQ8TB37 319 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 SMC6Q96SB8 1091 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 WWTR1Q9GZV5 400 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 TSPAN10Q9H1Z9 355 aaPredicted RBP16.86■□□□□ 0.29
DDX39A-212ENST00000590260 MAT2BQ9NZL9 334 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 COPS7AQ9UBW8 275 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 ZNF639Q9UID6 485 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 MID2Q9UJV3 735 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 DTX4Q9Y2E6 619 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 DNAJC15Q9Y5T4 150 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 EML6Q6ZMW3 1958 aa16.86■□□□□ 0.29
DDX39A-212ENST00000590260 NPIPB8E9PQR5 432 aa16.85■□□□□ 0.29
DDX39A-212ENST00000590260 H3BQF6 201 aa16.85■□□□□ 0.29
DDX39A-212ENST00000590260 NPHS1O60500 1241 aa16.85■□□□□ 0.29
DDX39A-212ENST00000590260 CRYABP02511 175 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms