RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 TMEM126BQ8IUX1 230 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 PLD3Q8IV08 490 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 SLC30A8Q8IWU4 369 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 LSM14AQ8ND56 463 aaKnown RBP6.91□□□□□ -1.3
SMAD4-210ENST00000590061 OR4K14Q8NGD5 310 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 OR8J3Q8NGG0 315 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 OR2I1PQ8NGU4 316 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.91□□□□□ -1.3
SMAD4-210ENST00000590061 FKBP10Q96AY3 582 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 TBC1D20Q96BZ9 403 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 TM4SF18Q96CE8 201 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 KLHL29Q96CT2 875 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 ZNF501Q96CX3 271 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-210ENST00000590061 WDR89Q96FK6 387 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-210ENST00000590061 ART5Q96L15 291 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 TSSK3Q96PN8 268 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 BBS4Q96RK4 519 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 HBEGFQ99075 208 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 KRTAP4-12Q9BQ66 201 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 EFHD1Q9BUP0 239 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 C1orf50Q9BV19 199 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 TRIM15Q9C019 465 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 LRMDAQ9H2I8 198 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 MUC13Q9H3R2 512 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 CCDC86Q9H6F5 360 aaKnown RBP6.91□□□□□ -1.3
SMAD4-210ENST00000590061 RPF2Q9H7B2 306 aaKnown RBP6.91□□□□□ -1.3
SMAD4-210ENST00000590061 WDR54Q9H977 334 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 HHATLQ9HCP6 504 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 ZNF304Q9HCX3 659 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 FAM60AQ9NP50 221 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 SPAG4Q9NPE6 437 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 SLC35C2Q9NQQ7 365 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 FSCN3Q9NQT6 498 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 SLC39A1Q9NY26 324 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 ARMCX1Q9P291 453 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 GPN3Q9UHW5 284 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-210ENST00000590061 VPS4AQ9UN37 437 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 CFL2Q9Y281 166 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 BTBD3Q9Y2F9 522 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 PADI2Q9Y2J8 665 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 NAALAD2Q9Y3Q0 740 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 L3MBTL1Q9Y468 752 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 ASB4Q9Y574 426 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 PCDHGB3Q9Y5G1 929 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 PCDHGA3Q9Y5H0 932 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 PCDHA9Q9Y5H5 950 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 GMEB1Q9Y692 573 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 CEP250Q9BV73 2442 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 LOC105369274A0A096LPK9 316 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 LOC102723532A0A0G2JNH3 316 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.9□□□□□ -1.3
SMAD4-210ENST00000590061 A0A1W2PRB8 838 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 DUXAA6NLW8 204 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 A8MU76 341 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 SAP18O00422 153 aaKnown RBP6.9□□□□□ -1.3
SMAD4-210ENST00000590061 AIM2O14862 343 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 SLC30A4O14863 429 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 ANKRD28O15084 1053 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 TMPRSS2O15393 492 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 PDPK1O15530 556 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 ZNF749O43361 778 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 KIF1CO43896 1103 aaKnown RBP6.9□□□□□ -1.3
SMAD4-210ENST00000590061 CTNSO60931 367 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 SCRG1O75711 98 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 CIB2O75838 187 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 DNAJC8O75937 253 aaPredicted RBP6.9□□□□□ -1.3
SMAD4-210ENST00000590061 UBOX5O94941 541 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 ETHE1O95571 254 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 GPR75O95800 540 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 MT-CO3P00414 261 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 IL3P08700 152 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 FOSL1P15407 271 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 FBLP22087 321 aaKnown RBP6.9□□□□□ -1.3
SMAD4-210ENST00000590061 TGM1P22735 817 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 GABRA4P48169 554 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 ALDH9A1P49189 494 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 NUDT2P50583 147 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 MANFP55145 182 aaKnown RBP6.9□□□□□ -1.3
SMAD4-210ENST00000590061 LIM2P55344 173 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 RAE1P78406 368 aaKnown RBP6.9□□□□□ -1.3
SMAD4-210ENST00000590061 TAGLNQ01995 201 aaKnown RBP6.9□□□□□ -1.3
SMAD4-210ENST00000590061 CFHR1Q03591 330 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 STX4Q12846 297 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 NFYCQ13952 458 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 PTGR1Q14914 329 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 ISXQ2M1V0 245 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 HKDC1Q2TB90 917 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 C6orf10Q5SRN2 563 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 FRMPD2BQ6IN97 320 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 SLC48A1Q6P1K1 146 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 ZCCHC12Q6PEW1 402 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 TMEM64Q6YI46 380 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 ZNF574Q6ZN55 896 aaPredicted RBP6.9□□□□□ -1.3
SMAD4-210ENST00000590061 RAB11FIP2Q7L804 512 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 ASCL5Q7RTU5 278 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 EGFL6Q8IUX8 553 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 SFTPA2Q8IWL1 248 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 KIAA2013Q8IYS2 634 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 OR4N4Q8N0Y3 316 aa6.9□□□□□ -1.3
SMAD4-210ENST00000590061 PGAM4Q8N0Y7 254 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms