RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 CCDC22O60826 627 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 SEC24DO94855 1032 aaPredicted RBP12.74□□□□□ -0.37
VMP1-210ENST00000589823 ATP1B1P05026 303 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 IL6P05231 212 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 LAMP1P11279 417 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 IL12AP29459 219 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 S100A3P33764 101 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 GALNSP34059 522 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 KIR3DL1P43629 444 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 NCBP2P52298 156 aaKnown RBP eCLIP12.74□□□□□ -0.379e-8■□□□□ 10.2
VMP1-210ENST00000589823 POLR2JP52435 117 aaKnown RBP12.74□□□□□ -0.37
VMP1-210ENST00000589823 MANFP55145 182 aaKnown RBP12.74□□□□□ -0.37
VMP1-210ENST00000589823 ATP1A4Q13733 1029 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 PCOLCEQ15113 449 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 AGKQ53H12 422 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 ATP1A1-AS1Q5TC04 95 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 ANXA8L1Q5VT79 327 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 NDUFAF7Q7L592 441 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 CPSF7Q8N684 471 aaKnown RBP12.74□□□□□ -0.37
VMP1-210ENST00000589823 VPS37AQ8NEZ2 397 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 OR14A16Q8NHC5 309 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 CIDECQ96AQ7 238 aaPredicted RBP12.74□□□□□ -0.37
VMP1-210ENST00000589823 ART5Q96L15 291 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 FER1L6-AS2Q96M78 137 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 TUBB6Q9BUF5 446 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 TMEM45AQ9NWC5 275 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 CCDC167Q9P0B6 97 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 FBXL4Q9UKA2 621 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 POLHQ9Y253 713 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 SCN2AQ99250 2005 aa12.74□□□□□ -0.37
VMP1-210ENST00000589823 APC2O95996 2303 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 CCDC88CQ9P219 2028 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 A0A1W2PQ72 361 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 A0A1W2PRB8 838 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 FAM234BA2RU67 622 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 C17orf105B2RV13 164 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 C9JVG2 144 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 NDUFAB1O14561 156 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 HPP00738 406 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 COX6A1P12074 109 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 ITPKBP27987 946 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 PGDP52209 483 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 RRADP55042 308 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 KCNK10P57789 538 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 TERF2Q15554 542 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 CEBPEQ15744 281 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 PRSS53Q2L4Q9 553 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 FAM174BQ3ZCQ3 159 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 SPANXN4Q5MJ08 99 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 CPZQ66K79 652 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 OR4F3Q6IEY1 312 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 GALNT12Q8IXK2 581 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 OR8J2Q8NGG1 315 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 OR9I1Q8NGQ6 314 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 BCAS4Q8TDM0 211 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 NUDT8Q8WV74 236 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 RIT1Q92963 219 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 AMDHD1Q96NU7 426 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 MESP1Q9BRJ9 268 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 GLIPR2Q9H4G4 154 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 ZNF385DQ9H6B1 395 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 ZNF160Q9HCG1 818 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 SAR1AQ9NR31 198 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 ACSS1Q9NUB1 689 aaPredicted RBP12.73□□□□□ -0.37
VMP1-210ENST00000589823 FAM120CQ9NX05 1096 aaKnown RBP12.73□□□□□ -0.37
VMP1-210ENST00000589823 MAN2B2Q9Y2E5 1009 aa12.73□□□□□ -0.37
VMP1-210ENST00000589823 K7ENP7 123 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 RNASET2O00584 256 aaKnown RBP12.72□□□□□ -0.37
VMP1-210ENST00000589823 FCHO1O14526 889 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 PGRP06401 933 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 ICAM2P13598 275 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 ADSLP30566 484 aaPredicted RBP12.72□□□□□ -0.37
VMP1-210ENST00000589823 GPC1P35052 558 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 FRKP42685 505 aaPredicted RBP12.72□□□□□ -0.37
VMP1-210ENST00000589823 DGKQP52824 942 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 DUSP2Q05923 314 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 VAC14Q08AM6 782 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 HSPB3Q12988 150 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 ZNF267Q14586 743 aaPredicted RBP12.72□□□□□ -0.37
VMP1-210ENST00000589823 LTB4RQ15722 352 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 EXT1Q16394 746 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 MPEG1Q2M385 716 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 SPRED3Q2MJR0 410 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 BTBD16Q32M84 506 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 INO80CQ6PI98 192 aaPredicted RBP12.72□□□□□ -0.37
VMP1-210ENST00000589823 MTDHQ86UE4 582 aaKnown RBP12.72□□□□□ -0.37
VMP1-210ENST00000589823 VWA5B2Q8N398 1253 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 TMEM102Q8N9M5 508 aaPredicted RBP12.72□□□□□ -0.37
VMP1-210ENST00000589823 CLEC1AQ8NC01 280 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 CCDC197Q8NCU1 140 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 MORN4Q8NDC4 146 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 SUN3Q8TAQ9 357 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 PTPMT1Q8WUK0 201 aaPredicted RBP12.72□□□□□ -0.37
VMP1-210ENST00000589823 OR5P2Q8WZ92 322 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 OR52E6Q96RD3 313 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 WDR77Q9BQA1 342 aaPredicted RBP12.72□□□□□ -0.37
VMP1-210ENST00000589823 CNPPD1Q9BV87 410 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 NMUR2Q9GZQ4 415 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 CXorf21Q9HAI6 301 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 CPNE5Q9HCH3 593 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms