RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 CD8B2A6NJW9 211 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 A8MUA0 341 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 A8MXE2 369 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 OVOL3O00110 214 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 COPEO14579 308 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 ADAM11O75078 769 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 NDUFS7O75251 213 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 HAUS5O94927 633 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 B3GALT4O96024 378 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 PLAUP00749 431 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 AHSGP02765 367 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 CATP04040 527 aaKnown RBP5.57□□□□□ -1.52
VPS25-204ENST00000589577 S100BP04271 92 aaPredicted RBP5.57□□□□□ -1.52
VPS25-204ENST00000589577 FHP07954 510 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 HIST1H2AGP0C0S8 130 aaPredicted RBP5.57□□□□□ -1.52
VPS25-204ENST00000589577 TMIGD3P0DMS9 266 aaPredicted RBP5.57□□□□□ -1.52
VPS25-204ENST00000589577 NEFHP12036 1026 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 SRD5A1P18405 259 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 HIST1H2ADP20671 130 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 IGFBP5P24593 272 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 PIGAP37287 484 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 CLCN2P51788 898 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 RAB10P61026 200 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 FAM27E3Q08E93 113 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 NAA25Q14CX7 972 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 EFTUD2Q15029 972 aaKnown RBP eCLIP5.57□□□□□ -1.52
VPS25-204ENST00000589577 ETFDHQ16134 617 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.57□□□□□ -1.52
VPS25-204ENST00000589577 PRR31Q5SQ13 230 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 DCST1Q5T197 706 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 HECTD2Q5U5R9 776 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 ICE2Q659A1 982 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 VASNQ6EMK4 673 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 FAM47EQ6ZV65 393 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 LCA5Q86VQ0 697 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 GPALPP1Q8IXQ4 340 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 DEPDC4Q8N2C3 294 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 ZNF441Q8N8Z8 693 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 CCDC63Q8NA47 563 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 KCT2Q8NC54 265 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 B3GNT7Q8NFL0 401 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 EPS8L3Q8TE67 593 aaKnown RBP5.57□□□□□ -1.52
VPS25-204ENST00000589577 HIST1H2AHQ96KK5 128 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 ZIM3Q96PE6 472 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 TRIB1Q96RU8 372 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 NDNQ99608 321 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 TIMP4Q99727 224 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 HIST1H2AJQ99878 128 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 H2AFJQ9BTM1 129 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 TMEM109Q9BVC6 243 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 SHARPINQ9H0F6 387 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 VPS11Q9H270 941 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 SLCO5A1Q9H2Y9 848 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 NMRAL1Q9HBL8 299 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 PROK2Q9HC23 129 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 ACKR4Q9NPB9 350 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 MED4Q9NPJ6 270 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 NECTIN3Q9NQS3 549 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 NKIRAS1Q9NYS0 192 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 NDRG3Q9UGV2 375 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 TAC3Q9UHF0 121 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 FBXW2Q9UKT8 454 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 PPIEQ9UNP9 301 aaKnown RBP5.57□□□□□ -1.52
VPS25-204ENST00000589577 ACOT9Q9Y305 439 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 NAALAD2Q9Y3Q0 740 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 PSAT1Q9Y617 370 aa5.57□□□□□ -1.52
VPS25-204ENST00000589577 EXPH5Q8NEV8 1989 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 ALPK2Q86TB3 2170 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 IGHV4-30-2A0A087WSY4 118 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 A0A096LPK6 155 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 CCDC189A1A4V9 331 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 ZNF839A8K0R7 811 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 SYCE1LA8MT33 242 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 CXorf49A8MYA2 514 aaPredicted RBP5.56□□□□□ -1.52
VPS25-204ENST00000589577 HMGB1P1B2RPK0 211 aaPredicted RBP5.56□□□□□ -1.52
VPS25-204ENST00000589577 TGFBR3LH3BV60 316 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 WWP2O00308 870 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 SNPHO15079 494 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 ZBTB14O43829 449 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 B4GALT2O60909 372 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 TMCC2O75069 709 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 GLRA3O75311 464 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 NIPSNAP2O75323 286 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 ERN1O75460 977 aaKnown RBP5.56□□□□□ -1.52
VPS25-204ENST00000589577 PIAS1O75925 651 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 MYO1DO94832 1006 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 IGHV4-39P01824 125 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 SHBGP04278 402 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 LTA4HP09960 611 aaKnown RBP5.56□□□□□ -1.52
VPS25-204ENST00000589577 COL6A2P12110 1019 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 ZNF16P17020 682 aaPredicted RBP5.56□□□□□ -1.52
VPS25-204ENST00000589577 ITGA2P17301 1181 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 TAC1P20366 129 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 IL10P22301 178 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 AOAHP28039 575 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 PPP2R1BP30154 601 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 CPOXP36551 454 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 CCNFP41002 786 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 CPA2P48052 419 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 CASP9P55211 416 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms