RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 CLCA3PQ9Y6N3 262 aa11.39□□□□□ -0.59
DNMT1-218ENST00000589294 CCDC88CQ9P219 2028 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 PRSS51A0A1B0GVH4 220 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 TAF4O00268 1085 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 NDUFAB1O14561 156 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 NKX2-8O15522 239 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 PDPK1O15530 556 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 PGRP06401 933 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 IFI6P09912 130 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 IL12AP29459 219 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 NTSP30990 170 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 KIR3DL1P43629 444 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 MANFP55145 182 aaKnown RBP11.38□□□□□ -0.59
DNMT1-218ENST00000589294 TLE3Q04726 772 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 MAP4K2Q12851 820 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 IL10RAQ13651 578 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 AGKQ53H12 422 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 ANKRD26P1Q6NSI1 321 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 CCDC81Q6ZN84 652 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 LANCL3Q6ZV70 420 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 MRGPREQ86SM8 312 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 MTDHQ86UE4 582 aaKnown RBP11.38□□□□□ -0.59
DNMT1-218ENST00000589294 FUNDC1Q8IVP5 155 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 MORN4Q8NDC4 146 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 OR14A16Q8NHC5 309 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 ZFP28Q8NHY6 868 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 BCAS4Q8TDM0 211 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 PTPMT1Q8WUK0 201 aaPredicted RBP11.38□□□□□ -0.59
DNMT1-218ENST00000589294 ZCCHC14Q8WYQ9 949 aaKnown RBP11.38□□□□□ -0.59
DNMT1-218ENST00000589294 OR5P2Q8WZ92 322 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 RIT1Q92963 219 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 PPWD1Q96BP3 646 aaKnown RBP11.38□□□□□ -0.59
DNMT1-218ENST00000589294 ERP27Q96DN0 273 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 IMMP1LQ96LU5 166 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 FER1L6-AS2Q96M78 137 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 AMDHD1Q96NU7 426 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 LPAR4Q99677 370 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 TUBB6Q9BUF5 446 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 CXorf21Q9HAI6 301 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 PNO1Q9NRX1 252 aaKnown RBP11.38□□□□□ -0.59
DNMT1-218ENST00000589294 P4HTMQ9NXG6 502 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 PPIEQ9UNP9 301 aaKnown RBP11.38□□□□□ -0.59
DNMT1-218ENST00000589294 ZFHX4Q86UP3 3567 aa11.38□□□□□ -0.59
DNMT1-218ENST00000589294 SCN2AQ99250 2005 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 IGHV1-45A0A0A0MS14 117 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 NSG1A0A0A6YYJ2 146 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 A0A1W2PRB8 838 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 C17orf105B2RV13 164 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 RNASET2O00584 256 aaKnown RBP11.37□□□□□ -0.59
DNMT1-218ENST00000589294 SCN2BO60939 215 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 DCTN3O75935 186 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 HPP00738 406 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 WT1P19544 449 aaPredicted RBP11.37□□□□□ -0.59
DNMT1-218ENST00000589294 ZFP36L2P47974 494 aaKnown RBP11.37□□□□□ -0.59
DNMT1-218ENST00000589294 NCBP2P52298 156 aaKnown RBP eCLIP11.37□□□□□ -0.59
DNMT1-218ENST00000589294 AP2B1P63010 937 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 SRSF6Q13247 344 aaKnown RBP11.37□□□□□ -0.59
DNMT1-218ENST00000589294 PCOLCEQ15113 449 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 EXT1Q16394 746 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 MPEG1Q2M385 716 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 SPRED3Q2MJR0 410 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 ZNF750Q32MQ0 723 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 FAM174BQ3ZCQ3 159 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 ZNF385BQ569K4 471 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 SPANXN4Q5MJ08 99 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 MSANTD1Q6ZTZ1 278 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 CCDC197Q8NCU1 140 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 NFAM1Q8NET5 270 aaPredicted RBP11.37□□□□□ -0.59
DNMT1-218ENST00000589294 SUN3Q8TAQ9 357 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 ZNF675Q8TD23 568 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 NUDT8Q8WV74 236 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 C8orf44Q96CB5 159 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 SENP5Q96HI0 755 aaPredicted RBP11.37□□□□□ -0.59
DNMT1-218ENST00000589294 ART5Q96L15 291 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 DCBLD2Q96PD2 775 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 OR52E6Q96RD3 313 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 WDR77Q9BQA1 342 aaPredicted RBP11.37□□□□□ -0.59
DNMT1-218ENST00000589294 NMUR2Q9GZQ4 415 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 GLIPR2Q9H4G4 154 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 FAM120CQ9NX05 1096 aaKnown RBP11.37□□□□□ -0.59
DNMT1-218ENST00000589294 CCDC167Q9P0B6 97 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 BTNL2Q9UIR0 455 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 PCDHGB4Q9UN71 923 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 NUP210LQ5VU65 1888 aa11.37□□□□□ -0.59
DNMT1-218ENST00000589294 ACACBO00763 2458 aa11.36□□□□□ -0.59
DNMT1-218ENST00000589294 MYOCOSA0A1B0GUC4 107 aa11.36□□□□□ -0.59
DNMT1-218ENST00000589294 A0A1W2PS29 197 aa11.36□□□□□ -0.59
DNMT1-218ENST00000589294 CDC14CA4D256 554 aa11.36□□□□□ -0.59
DNMT1-218ENST00000589294 CCDC154A6NI56 674 aa11.36□□□□□ -0.59
DNMT1-218ENST00000589294 SAGE2PA6NJ88 616 aa11.36□□□□□ -0.59
DNMT1-218ENST00000589294 K7ENP7 123 aa11.36□□□□□ -0.59
DNMT1-218ENST00000589294 PLOD2O00469 737 aa11.36□□□□□ -0.59
DNMT1-218ENST00000589294 FCHO1O14526 889 aa11.36□□□□□ -0.59
DNMT1-218ENST00000589294 CFLARO15519 480 aa11.36□□□□□ -0.59
DNMT1-218ENST00000589294 BCAS2O75934 225 aaPredicted RBP11.36□□□□□ -0.59
DNMT1-218ENST00000589294 COX6A1P12074 109 aa11.36□□□□□ -0.59
DNMT1-218ENST00000589294 NT5EP21589 574 aa11.36□□□□□ -0.59
DNMT1-218ENST00000589294 GPR143P51810 404 aa11.36□□□□□ -0.59
DNMT1-218ENST00000589294 DGKQP52824 942 aa11.36□□□□□ -0.59
DNMT1-218ENST00000589294 RRADP55042 308 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms