RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 HERVK_113P63132 956 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 ERVK-8P63133 956 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 ADAM8P78325 824 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 SLAMF1Q13291 335 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 HIST2H2ACQ16777 129 aaPredicted RBP16.9■□□□□ 0.3
CCDC43-204ENST00000588687 HIST2H2AA3Q6FI13 130 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 OR4C11Q6IEV9 310 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 MRM1Q6IN84 353 aaKnown RBP16.9■□□□□ 0.3
CCDC43-204ENST00000588687 GRHL2Q6ISB3 625 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 FAM13CQ8NE31 585 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 FAM222BQ8WU58 562 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 TANKQ92844 425 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 EXT2Q93063 718 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 RNASE6Q93091 150 aaKnown RBP16.9■□□□□ 0.3
CCDC43-204ENST00000588687 UBE2E3Q969T4 207 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 CMTM7Q96FZ5 175 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 ART5Q96L15 291 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 GAL3ST4Q96RP7 486 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 ERVK-6Q9BXR3 956 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 TRIM31Q9BZY9 425 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 PRDM14Q9GZV8 571 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 MS4A12Q9NXJ0 267 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 RNF112Q9ULX5 631 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 ERVK-19Q9WJR5 959 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 IKBKGQ9Y6K9 419 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 TCRBV9S1A1TA0A576 114 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 ANKRD33BA6NCL7 494 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 FAM159BA6NKW6 160 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 EPPINO95925 133 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 SLC35E2BP0CK96 405 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 PCNAP12004 261 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 STMN1P16949 149 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 PPP2R2AP63151 447 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 DUSP8Q13202 625 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 DAZAP2Q15038 168 aaPredicted RBP16.89■□□□□ 0.29
CCDC43-204ENST00000588687 BICRALQ6AI39 1079 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 CHSY3Q70JA7 882 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 ISCA2Q86U28 154 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 GPR180Q86V85 440 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 HUS1BQ8NHY5 278 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 CPNE1Q99829 537 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 DOHHQ9BU89 302 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 ALG9Q9H6U8 611 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 RYDENQ9NUL5 291 aaKnown RBP16.89■□□□□ 0.29
CCDC43-204ENST00000588687 NUDT4Q9NZJ9 180 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 TSC22D4Q9Y3Q8 395 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 MED12Q93074 2177 aa16.89■□□□□ 0.29
CCDC43-204ENST00000588687 A0A0A6YYD5 115 aa16.88■□□□□ 0.29
CCDC43-204ENST00000588687 A0A1W2PS29 197 aa16.88■□□□□ 0.29
CCDC43-204ENST00000588687 K7EPI3 171 aa16.88■□□□□ 0.29
CCDC43-204ENST00000588687 DVL2O14641 736 aa16.88■□□□□ 0.29
CCDC43-204ENST00000588687 TMPRSS11DO60235 418 aa16.88■□□□□ 0.29
CCDC43-204ENST00000588687 MTHFD2P13995 350 aa16.88■□□□□ 0.29
CCDC43-204ENST00000588687 TACR1P25103 407 aa16.88■□□□□ 0.29
CCDC43-204ENST00000588687 SERPINB3P29508 390 aa16.88■□□□□ 0.29
CCDC43-204ENST00000588687 TIMP3P35625 211 aa16.88■□□□□ 0.29
CCDC43-204ENST00000588687 RAB10P61026 200 aa16.88■□□□□ 0.29
CCDC43-204ENST00000588687 BIKQ13323 160 aa16.88■□□□□ 0.29
CCDC43-204ENST00000588687 RNF111Q6ZNA4 994 aa16.88■□□□□ 0.29
CCDC43-204ENST00000588687 LACC1Q8IV20 430 aa16.88■□□□□ 0.29
CCDC43-204ENST00000588687 RBM18Q96H35 190 aaKnown RBP16.88■□□□□ 0.29
CCDC43-204ENST00000588687 ZNF597Q96LX8 424 aa16.88■□□□□ 0.29
CCDC43-204ENST00000588687 KRT12Q99456 494 aa16.88■□□□□ 0.29
CCDC43-204ENST00000588687 TIMP4Q99727 224 aa16.88■□□□□ 0.29
CCDC43-204ENST00000588687 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.88■□□□□ 0.29
CCDC43-204ENST00000588687 ZNF629Q9UEG4 869 aaPredicted RBP16.88■□□□□ 0.29
CCDC43-204ENST00000588687 PHF11Q9UIL8 331 aa16.88■□□□□ 0.29
CCDC43-204ENST00000588687 ASB4Q9Y574 426 aa16.88■□□□□ 0.29
CCDC43-204ENST00000588687 ZANQ9Y493 2812 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 A0A1W2PR48 441 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 OR6C76A6NM76 312 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 EFCAB8A8MWE9 144 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 AHRRA9YTQ3 701 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 UBXN8O00124 270 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 KERAO60938 352 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 EEDO75530 441 aaKnown RBP16.87■□□□□ 0.29
CCDC43-204ENST00000588687 ATE1O95260 518 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 HPNP05981 417 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 FOSL1P15407 271 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 DNASE1P24855 282 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 GDF1P27539 372 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 BSGP35613 385 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 GP5P40197 560 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 PIK3CBP42338 1070 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 ARFIP1P53367 373 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 ZNF267Q14586 743 aaPredicted RBP16.87■□□□□ 0.29
CCDC43-204ENST00000588687 RPS6KA2Q15349 733 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 DCST1Q5T197 706 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 TMEM64Q6YI46 380 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 CYS1Q717R9 158 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 SLC29A4Q7RTT9 530 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 CMC1Q7Z7K0 106 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 KRTAP1-3Q8IUG1 177 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 UCN3Q969E3 161 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 RGMAQ96B86 450 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 PELOQ9BRX2 385 aaKnown RBP16.87■□□□□ 0.29
CCDC43-204ENST00000588687 OPTCQ9UBM4 332 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 SNX24Q9Y343 169 aa16.87■□□□□ 0.29
CCDC43-204ENST00000588687 FN1P02751 2386 aaKnown RBP16.86■□□□□ 0.29
CCDC43-204ENST00000588687 C15orf38-AP3S2A0A0A6YYH1 394 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms