RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 HCN1O60741 890 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 EEDO75530 441 aaKnown RBP12.61□□□□□ -0.39
HDAC5-208ENST00000588419 TRAPPC6AO75865 159 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 IGKV3-11P04433 115 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 GABRA1P14867 456 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 BMP5P22003 454 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 CRABP2P29373 138 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 SERPINB3P29508 390 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 STX2P32856 288 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 CASP2P42575 452 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 IST1P53990 364 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 DLX5P56178 289 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 CPSF6Q16630 551 aaKnown RBP eCLIP12.61□□□□□ -0.39
HDAC5-208ENST00000588419 PFKFB4Q16877 469 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 HYAL4Q2M3T9 481 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 SLC25A35Q3KQZ1 300 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 FBXW10Q5XX13 1052 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 HLA-DQA1Q5Y7H0 255 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 ADGRD1Q6QNK2 874 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 ARSKQ6UWY0 536 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 LYPD8Q6UX82 237 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 ST13P4Q8IZP2 240 aaPredicted RBP12.61□□□□□ -0.39
HDAC5-208ENST00000588419 PAQR8Q8TEZ7 354 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 DIO2Q92813 273 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 TANKQ92844 425 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 RIT1Q92963 219 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 UCN3Q969E3 161 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 PELOQ9BRX2 385 aaKnown RBP12.61□□□□□ -0.39
HDAC5-208ENST00000588419 WDR41Q9HAD4 459 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 SLC24A3Q9HC58 644 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 LYARQ9NX58 379 aaKnown RBP12.61□□□□□ -0.39
HDAC5-208ENST00000588419 GRHL1Q9NZI5 618 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 MPDZO75970 2070 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 AKAP6Q13023 2319 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 A0A1W2PS29 197 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 SYCE1LA8MT33 242 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 FAM47E-STBD1D6RA91 191 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 TMPRSS11DO60235 418 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 KRT38O76015 456 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 AIFM1O95831 613 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 GSTA2P09210 222 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 FBXO45P0C2W1 286 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 SSTR4P31391 388 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 KIR2DL3P43628 341 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 MASP1P48740 699 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 FBXW4P57775 412 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 SETDB1Q15047 1291 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 EBPQ15125 230 aaKnown RBP12.6□□□□□ -0.39
HDAC5-208ENST00000588419 RIPPLY2Q5TAB7 128 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 C6orf163Q5TEZ5 329 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 MROH9Q5TGP6 573 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 TMEM198Q66K66 360 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 BICRALQ6AI39 1079 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 MAATS1Q7Z4T9 603 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 GOLGA7Q7Z5G4 137 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 NUDT13Q86X67 352 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 ULK2Q8IYT8 1036 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 PRR22Q8IZ63 422 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 TAGAPQ8N103 731 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 ZCCHC7Q8N3Z6 543 aaKnown RBP12.6□□□□□ -0.39
HDAC5-208ENST00000588419 SLC15A4Q8N697 577 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 C7orf57Q8NEG2 295 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 NEIL3Q8TAT5 605 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 REPS1Q96D71 796 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 SH2D2AQ9NP31 389 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 CCM2LQ9NUG4 571 aaPredicted RBP12.6□□□□□ -0.39
HDAC5-208ENST00000588419 CNIH4Q9P003 139 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 RNF14Q9UBS8 474 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 ADGRE2Q9UHX3 823 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 CNOT11Q9UKZ1 510 aaKnown RBP12.6□□□□□ -0.39
HDAC5-208ENST00000588419 PYCARDQ9ULZ3 195 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 CAMK2AQ9UQM7 478 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 ACOT9Q9Y305 439 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 UTP11Q9Y3A2 253 aaKnown RBP12.6□□□□□ -0.39
HDAC5-208ENST00000588419 PCDHGA11Q9Y5H2 935 aa12.6□□□□□ -0.39
HDAC5-208ENST00000588419 CHCHD2Q9Y6H1 151 aaPredicted RBP12.6□□□□□ -0.39
HDAC5-208ENST00000588419 SPG11Q96JI7 2443 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 A0A087X1B8 175 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 A0A0A6YYD5 115 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 C2orf92A0A1B0GVN3 265 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 A0A1W2PR48 441 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 KDM4EB2RXH2 506 aaPredicted RBP12.59□□□□□ -0.39
HDAC5-208ENST00000588419 PROM1O43490 865 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 GPR75O95800 540 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 C1QAP02745 245 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 FAM58BPP0C7Q3 252 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 PIK3CBP42338 1070 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 MAGEA4P43358 317 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 NEK2P51955 445 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 SLC37A1P57057 533 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 TBL3Q12788 808 aaKnown RBP12.59□□□□□ -0.39
HDAC5-208ENST00000588419 DUSP8Q13202 625 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 GTF2H2Q13888 395 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 E2F2Q14209 437 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 CEBPEQ15744 281 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 NNATQ16517 81 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 SPRED3Q2MJR0 410 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 GTF2H2CQ6P1K8 395 aa12.59□□□□□ -0.39
HDAC5-208ENST00000588419 DND1Q8IYX4 353 aaKnown RBP12.59□□□□□ -0.39
HDAC5-208ENST00000588419 RELL2Q8NC24 303 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms