RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 COL28A1Q2UY09 1125 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 BTBD16Q32M84 506 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 LSM12Q3MHD2 195 aaKnown RBP8.47□□□□□ -1.05
CIRBP-218ENST00000588344 SLC9B1Q4ZJI4 515 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 PDCD4Q53EL6 469 aaKnown RBP8.47□□□□□ -1.05
CIRBP-218ENST00000588344 ATP1A1-AS1Q5TC04 95 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 ANXA8L1Q5VT79 327 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 AGAP7PQ5VUJ5 663 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 H3F3CQ6NXT2 135 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 MAVSQ7Z434 540 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 CAMKMTQ7Z624 323 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 RIMKLAQ8IXN7 391 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 CCDC116Q8IYX3 515 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 LGI4Q8N135 537 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 MIER2Q8N344 545 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 SLC5A8Q8N695 610 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 LSM14AQ8ND56 463 aaKnown RBP8.47□□□□□ -1.05
CIRBP-218ENST00000588344 NFAM1Q8NET5 270 aaPredicted RBP8.47□□□□□ -1.05
CIRBP-218ENST00000588344 B3GNT7Q8NFL0 401 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 OR8J2Q8NGG1 315 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 OR5L2Q8NGL0 311 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 OR8K3Q8NH51 312 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 ELP5Q8TE02 316 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 PTPMT1Q8WUK0 201 aaPredicted RBP8.47□□□□□ -1.05
CIRBP-218ENST00000588344 TM9SF4Q92544 642 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 EXOSC8Q96B26 276 aaKnown RBP8.47□□□□□ -1.05
CIRBP-218ENST00000588344 TESCQ96BS2 214 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 VMP1Q96GC9 406 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 SENP5Q96HI0 755 aaPredicted RBP8.47□□□□□ -1.05
CIRBP-218ENST00000588344 FBXL20Q96IG2 436 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 RILPQ96NA2 401 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 AGAP4Q96P64 663 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 ZNF317Q96PQ6 595 aaPredicted RBP8.47□□□□□ -1.05
CIRBP-218ENST00000588344 LMF1Q96S06 567 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 WDR77Q9BQA1 342 aaPredicted RBP8.47□□□□□ -1.05
CIRBP-218ENST00000588344 C1orf50Q9BV19 199 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 BRINP2Q9C0B6 783 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 SEMA4CQ9C0C4 833 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 BHLHE41Q9C0J9 482 aaPredicted RBP8.47□□□□□ -1.05
CIRBP-218ENST00000588344 CXorf21Q9HAI6 301 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 NPHS2Q9NP85 383 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 SDR39U1Q9NRG7 319 aaPredicted RBP8.47□□□□□ -1.05
CIRBP-218ENST00000588344 FGFR1OP2Q9NVK5 253 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 ZIM2Q9NZV7 527 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 SH3BP4Q9P0V3 963 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 C5AR2Q9P296 337 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 KLHL14Q9P2G3 628 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 HEY2Q9UBP5 337 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 PCDHGA9Q9Y5G4 932 aaKnown RBP8.47□□□□□ -1.05
CIRBP-218ENST00000588344 ZFHX4Q86UP3 3567 aa8.47□□□□□ -1.05
CIRBP-218ENST00000588344 APC2O95996 2303 aa8.46□□□□□ -1.05
CIRBP-218ENST00000588344 A0A087WV62 115 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 IGHV3-20A0A0C4DH32 117 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 A0A0G2JND7 137 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 WASHC1A8K0Z3 465 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 A8MUA0 341 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 TGFBR3LH3BV60 316 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 PLOD2O00469 737 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 SCAMP2O15127 329 aaKnown RBP8.46□□□□□ -1.06
CIRBP-218ENST00000588344 AKAP10O43572 662 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 PRKRAO75569 313 aaKnown RBP8.46□□□□□ -1.06
CIRBP-218ENST00000588344 SLC22A3O75751 556 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 CEACAM4O75871 244 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 IL6P05231 212 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 ITGA3P26006 1051 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 LSP1P33241 339 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 FEN1P39748 380 aaKnown RBP8.46□□□□□ -1.06
CIRBP-218ENST00000588344 FRKP42685 505 aaPredicted RBP8.46□□□□□ -1.06
CIRBP-218ENST00000588344 CCL11P51671 97 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 GPR143P51810 404 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 ARFIP2P53365 341 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 DIO3P55073 304 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 MANFP55145 182 aaKnown RBP8.46□□□□□ -1.06
CIRBP-218ENST00000588344 PSPHP78330 225 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 ID2Q02363 134 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 PTGR1Q14914 329 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 CRB2Q5IJ48 1285 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 FAM219BQ5XKK7 198 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 C19orf48Q6RUI8 117 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 HSDL2Q6YN16 418 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 CPLX4Q7Z7G2 160 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 GALNT12Q8IXK2 581 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 SHISA5Q8N114 240 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 VWA5B2Q8N398 1253 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 ZNF675Q8TD23 568 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 OR5P2Q8WZ92 322 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 GFM2Q969S9 779 aaKnown RBP8.46□□□□□ -1.06
CIRBP-218ENST00000588344 PPWD1Q96BP3 646 aaKnown RBP8.46□□□□□ -1.06
CIRBP-218ENST00000588344 CNRIP1Q96F85 164 aaPredicted RBP8.46□□□□□ -1.06
CIRBP-218ENST00000588344 THOC3Q96J01 351 aaKnown RBP8.46□□□□□ -1.06
CIRBP-218ENST00000588344 ZNF354BQ96LW1 612 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 OR52B2Q96RD2 323 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 DEFB126Q9BYW3 111 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 KCNK13Q9HB14 408 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 C3orf14Q9HBI5 128 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 GPR83Q9NYM4 423 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 ABI3Q9P2A4 366 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 PRODH2Q9UF12 536 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 GIMAP2Q9UG22 337 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 DCTN4Q9UJW0 460 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms