RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 KCNF1Q9H3M0 494 aa5.9□□□□□ -1.46
SDF2-205ENST00000587629 GSX1Q9H4S2 264 aaPredicted RBP5.9□□□□□ -1.46
SDF2-205ENST00000587629 ZNF703Q9H7S9 590 aaPredicted RBP5.9□□□□□ -1.46
SDF2-205ENST00000587629 PROK2Q9HC23 129 aa5.9□□□□□ -1.46
SDF2-205ENST00000587629 SH2D2AQ9NP31 389 aa5.9□□□□□ -1.46
SDF2-205ENST00000587629 ZFP64Q9NPA5 681 aa5.9□□□□□ -1.46
SDF2-205ENST00000587629 ZNF358Q9NW07 568 aa5.9□□□□□ -1.46
SDF2-205ENST00000587629 OPTCQ9UBM4 332 aa5.9□□□□□ -1.46
SDF2-205ENST00000587629 ST6GALNAC2Q9UJ37 374 aa5.9□□□□□ -1.46
SDF2-205ENST00000587629 BOKQ9UMX3 212 aaPredicted RBP5.9□□□□□ -1.46
SDF2-205ENST00000587629 ANGPTL3Q9Y5C1 460 aa5.9□□□□□ -1.46
SDF2-205ENST00000587629 SPG11Q96JI7 2443 aa5.9□□□□□ -1.47
SDF2-205ENST00000587629 INTS1Q8N201 2190 aaKnown RBP5.9□□□□□ -1.47
SDF2-205ENST00000587629 EML6Q6ZMW3 1958 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 ITPR3Q14573 2671 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 A0A1W2PR48 441 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 A0A1W2PS29 197 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 SYNDIG1LA6NDD5 238 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 FAM159BA6NKW6 160 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 HSPB2A8KAH6 182 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 K7EPI3 171 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 SYT5O00445 386 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 PLPP1O14494 284 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 PGRMC2O15173 223 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 PROM1O43490 865 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 WIPF1O43516 503 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 EEDO75530 441 aaKnown RBP5.89□□□□□ -1.47
SDF2-205ENST00000587629 ACSL3O95573 720 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 GPR75O95800 540 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 SLC35E2BP0CK96 405 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 GABRA1P14867 456 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 ALOX15P16050 662 aaPredicted RBP5.89□□□□□ -1.47
SDF2-205ENST00000587629 EPB42P16452 691 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 SERPINB3P29508 390 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 TLX1P31314 330 aaPredicted RBP5.89□□□□□ -1.47
SDF2-205ENST00000587629 SSTR4P31391 388 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 SPRP35270 261 aaPredicted RBP5.89□□□□□ -1.47
SDF2-205ENST00000587629 GP5P40197 560 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 PAFAH1B1P43034 410 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 PIK3CGP48736 1102 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 NEK2P51955 445 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 DGKQP52824 942 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 FBXW4P57775 412 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 GPX6P59796 221 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 RPS13P62277 151 aaKnown RBP5.89□□□□□ -1.47
SDF2-205ENST00000587629 PPP2R2AP63151 447 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 IGLV3-21P80748 117 aaPredicted RBP5.89□□□□□ -1.47
SDF2-205ENST00000587629 IRF9Q00978 393 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 PLIN5Q00G26 463 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 TNFRSF17Q02223 184 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 CALCOCO2Q13137 446 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 DUSP8Q13202 625 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 ZKSCAN8Q15776 578 aaPredicted RBP5.89□□□□□ -1.47
SDF2-205ENST00000587629 HSPB2Q16082 182 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 CPSF6Q16630 551 aaKnown RBP eCLIP5.89□□□□□ -1.47
SDF2-205ENST00000587629 PFKFB4Q16877 469 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 CDKL4Q5MAI5 379 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 RIPPLY2Q5TAB7 128 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 DEPDC1Q5TB30 811 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 FBXW10Q5XX13 1052 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 TMEM198Q66K66 360 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 GRHL2Q6ISB3 625 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 BLOC1S3Q6QNY0 202 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 CYP20A1Q6UW02 462 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 TBC1D1Q86TI0 1168 aaPredicted RBP5.89□□□□□ -1.47
SDF2-205ENST00000587629 TGIF2LYQ8IUE0 185 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 PRR22Q8IZ63 422 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 LRRC25Q8N386 305 aaPredicted RBP5.89□□□□□ -1.47
SDF2-205ENST00000587629 FBXW8Q8N3Y1 598 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 PPM1NQ8N819 430 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 RELL2Q8NC24 303 aaPredicted RBP5.89□□□□□ -1.47
SDF2-205ENST00000587629 NAXEQ8NCW5 288 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 CHDHQ8NE62 594 aaPredicted RBP5.89□□□□□ -1.47
SDF2-205ENST00000587629 GOT1L1Q8NHS2 421 aaPredicted RBP5.89□□□□□ -1.47
SDF2-205ENST00000587629 NEIL3Q8TAT5 605 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 NUBPLQ8TB37 319 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 PAQR8Q8TEZ7 354 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 KCTD4Q8WVF5 259 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 DIO2Q92813 273 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 TANKQ92844 425 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 NXNL1Q96CM4 212 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 RMND5BQ96G75 393 aaPredicted RBP5.89□□□□□ -1.47
SDF2-205ENST00000587629 GNRHR2Q96P88 292 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 NAPGQ99747 312 aaPredicted RBP5.89□□□□□ -1.47
SDF2-205ENST00000587629 WWTR1Q9GZV5 400 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 EPB41L4BQ9H329 900 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 ACTR8Q9H981 624 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 NMRAL1Q9HBL8 299 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 SLC24A3Q9HC58 644 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 DMRT3Q9NQL9 472 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 RASSF1Q9NS23 344 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 IGSF5Q9NSI5 407 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.89□□□□□ -1.47
SDF2-205ENST00000587629 NUDT4Q9NZJ9 180 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 CNIH4Q9P003 139 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 CNOT11Q9UKZ1 510 aaKnown RBP5.89□□□□□ -1.47
SDF2-205ENST00000587629 CAMK2AQ9UQM7 478 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 SLC6A5Q9Y345 797 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 SAR1BQ9Y6B6 198 aa5.89□□□□□ -1.47
SDF2-205ENST00000587629 CHCHD2Q9Y6H1 151 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms