RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-208	ENST00000586900	MKRN2OS	H3BPM6	223 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	SCAMP2	O15127	329 aa	Known RBP	11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	POLR3G	O15318	223 aa	Predicted RBP	11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	ALDOC	P09972	364 aa	Known RBP	11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	ITGA3	P26006	1051 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	MPI	P34949	423 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	HPCAL1	P37235	193 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	FEN1	P39748	380 aa	Known RBP	11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	IDH3A	P50213	366 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	POLE2	P56282	527 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	IRX1	P78414	480 aa	Predicted RBP	11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	MAP4K2	Q12851	820 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	PTGR1	Q14914	329 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	GSTA3	Q16772	222 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	LSM12	Q3MHD2	195 aa	Known RBP	11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	IRAK1BP1	Q5VVH5	260 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	NXN	Q6DKJ4	435 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	H3F3C	Q6NXT2	135 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	APCDD1L	Q8NCL9	501 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	OR1N1	Q8NGS0	311 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	CLHC1	Q8NHS4	586 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	ZNF675	Q8TD23	568 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	RIT1	Q92963	219 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	EXOSC8	Q96B26	276 aa	Known RBP	11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	PPWD1	Q96BP3	646 aa	Known RBP	11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	VMP1	Q96GC9	406 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	FBXL20	Q96IG2	436 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	THOC3	Q96J01	351 aa	Known RBP	11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	OR52B2	Q96RD2	323 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	PRPF18	Q99633	342 aa	Known RBP	11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	ARHGAP9	Q9BRR9	750 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	BRINP2	Q9C0B6	783 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	CXorf21	Q9HAI6	301 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	TCF7L2	Q9NQB0	619 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	AIG1	Q9NVV5	245 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900	MGA	Q8IWI9	3026 aa		11.5	□□□□□ -0.57
PKN1-208	ENST00000586900		A0A1W2PS29	197 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	MASP2	O00187	686 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	CDK2AP1	O14519	115 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	ANKRD28	O15084	1053 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	UBD	O15205	165 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	AKAP10	O43572	662 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	DNAJB5	O75953	348 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	SLITRK5	O94991	958 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	LRAT	O95237	230 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	DDAH2	O95865	285 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	IGKV3-11	P04433	115 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	VIM	P08670	466 aa	Known RBP	11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	IFI6	P09912	130 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	TROVE2	P10155	538 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	ITGAM	P11215	1152 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	SFTPC	P11686	197 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	IDO1	P14902	403 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	FRK	P42685	505 aa	Predicted RBP	11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	MRPL19	P49406	292 aa	Known RBP	11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	CLCN2	P51788	898 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	FUT7	Q11130	342 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	PRSS53	Q2L4Q9	553 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	DPY19L1	Q2PZI1	675 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	PRICKLE4	Q2TBC4	344 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	ZNF750	Q32MQ0	723 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	C6orf163	Q5TEZ5	329 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	DGAT2L6	Q6ZPD8	337 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	CAMKMT	Q7Z624	323 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	HPS6	Q86YV9	775 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	GALNT12	Q8IXK2	581 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	CCDC116	Q8IYX3	515 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	ARMC10	Q8N2F6	343 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	LSM14A	Q8ND56	463 aa	Known RBP	11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	FDCSP	Q8NFU4	85 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	OR8K3	Q8NH51	312 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	SLC2A12	Q8TD20	617 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	ZNF721	Q8TF20	911 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	PSMF1	Q92530	271 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	GFM2	Q969S9	779 aa	Known RBP	11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	NCLN	Q969V3	563 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	PPCDC	Q96CD2	204 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	CTHRC1	Q96CG8	243 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	COQ8B	Q96D53	544 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	ERP27	Q96DN0	273 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	SENP5	Q96HI0	755 aa	Predicted RBP	11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	ZNF317	Q96PQ6	595 aa	Predicted RBP	11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	BBS4	Q96RK4	519 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	SMAD5	Q99717	465 aa	Known RBP	11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	EBF4	Q9BQW3	602 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	SLC25A23	Q9BV35	468 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	DPY30	Q9C005	99 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	ZNF552	Q9H707	407 aa	Predicted RBP	11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	KCNK13	Q9HB14	408 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	ATAD3A	Q9NVI7	634 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	FGFR1OP2	Q9NVK5	253 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	GPR83	Q9NYM4	423 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	SH3BP4	Q9P0V3	963 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	COPS7A	Q9UBW8	275 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	LHX6	Q9UPM6	363 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	GPR45	Q9Y5Y3	372 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	LOC400499	M0QZD8	3231 aa		11.49	□□□□□ -0.57
PKN1-208	ENST00000586900	ITPR1	Q14643	2758 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms