RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 GALNTL6Q49A17 601 aa13.14□□□□□ -0.31
TPM4-205ENST00000586833 NADK2Q4G0N4 442 aa13.14□□□□□ -0.31
TPM4-205ENST00000586833 HLA-DQA1Q5Y7H0 255 aa13.14□□□□□ -0.31
TPM4-205ENST00000586833 RNF111Q6ZNA4 994 aa13.14□□□□□ -0.31
TPM4-205ENST00000586833 R3HCC1LQ7Z5L2 792 aaKnown RBP13.14□□□□□ -0.31
TPM4-205ENST00000586833 BEST3Q8N1M1 668 aa13.14□□□□□ -0.31
TPM4-205ENST00000586833 KIF2BQ8N4N8 673 aa13.14□□□□□ -0.31
TPM4-205ENST00000586833 FNDC5Q8NAU1 212 aa13.14□□□□□ -0.31
TPM4-205ENST00000586833 FAM98AQ8NCA5 519 aaKnown RBP13.14□□□□□ -0.31
TPM4-205ENST00000586833 APCDD1LQ8NCL9 501 aa13.14□□□□□ -0.31
TPM4-205ENST00000586833 TMEM125Q96AQ2 219 aa13.14□□□□□ -0.31
TPM4-205ENST00000586833 ARL8AQ96BM9 186 aa13.14□□□□□ -0.31
TPM4-205ENST00000586833 PPWD1Q96BP3 646 aaKnown RBP13.14□□□□□ -0.31
TPM4-205ENST00000586833 BBS4Q96RK4 519 aa13.14□□□□□ -0.31
TPM4-205ENST00000586833 TNFRSF12AQ9NP84 129 aa13.14□□□□□ -0.31
TPM4-205ENST00000586833 YARS2Q9Y2Z4 477 aaKnown RBP13.14□□□□□ -0.31
TPM4-205ENST00000586833 SEC16AO15027 2179 aa13.14□□□□□ -0.31
TPM4-205ENST00000586833 MDC1Q14676 2089 aaKnown RBP13.13□□□□□ -0.31
TPM4-205ENST00000586833 MYOCOSA0A1B0GUC4 107 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 TRPC5OSA6NMA1 111 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 TMEM233B4DJY2 109 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 LSM1O15116 133 aaKnown RBP13.13□□□□□ -0.31
TPM4-205ENST00000586833 LYPLA1O75608 230 aaPredicted RBP13.13□□□□□ -0.31
TPM4-205ENST00000586833 ATP1B1P05026 303 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 PRPS2P11908 318 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 HPCAL1P37235 193 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 CYB561P49447 251 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 TNFSF10P50591 281 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 SSR4P51571 173 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 WDR4P57081 412 aaKnown RBP13.13□□□□□ -0.31
TPM4-205ENST00000586833 ERVK-8P63133 956 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 BST1Q10588 318 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 UGT3A2Q3SY77 523 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 FCRLBQ6BAA4 426 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 Q6ZSR9 355 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 ATCAYQ86WG3 371 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 DND1Q8IYX4 353 aaKnown RBP13.13□□□□□ -0.31
TPM4-205ENST00000586833 LRRC34Q8IZ02 419 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 NATD1Q8N6N6 113 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 ZNF781Q8N8C0 355 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 TMEM178AQ8NBL3 297 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 ZFP28Q8NHY6 868 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 NUBPLQ8TB37 319 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 SLC22A8Q8TCC7 542 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 LRRC8CQ8TDW0 803 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 EXOSC8Q96B26 276 aaKnown RBP13.13□□□□□ -0.31
TPM4-205ENST00000586833 ERP27Q96DN0 273 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 C11orf24Q96F05 449 aaPredicted RBP13.13□□□□□ -0.31
TPM4-205ENST00000586833 PRPF18Q99633 342 aaKnown RBP13.13□□□□□ -0.31
TPM4-205ENST00000586833 BRINP2Q9C0B6 783 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 TUBB1Q9H4B7 451 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 CXorf21Q9HAI6 301 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 SLC35C2Q9NQQ7 365 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 AGPAT4Q9NRZ5 378 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 PLA2G3Q9NZ20 509 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 MAP10Q9P2G4 905 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 PRODH2Q9UF12 536 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 HAO1Q9UJM8 370 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 CES1P1Q9UKY3 287 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 ERVK-19Q9WJR5 959 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 CCL27Q9Y4X3 112 aa13.13□□□□□ -0.31
TPM4-205ENST00000586833 UQCRHLA0A096LP55 91 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 CAPN14A8MX76 684 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 KLF11O14901 512 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 ITM2AO43736 263 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 PRAMEF2O60811 474 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 PEX11AO75192 247 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 DDAH2O95865 285 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 TRHRP34981 398 aaPredicted RBP13.12□□□□□ -0.31
TPM4-205ENST00000586833 FEN1P39748 380 aaKnown RBP13.12□□□□□ -0.31
TPM4-205ENST00000586833 GPR143P51810 404 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 PPP2R2AP63151 447 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 RNF4P78317 190 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 KIAA0040Q15053 153 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 PDCD2Q16342 344 aaPredicted RBP13.12□□□□□ -0.31
TPM4-205ENST00000586833 XKR7Q5GH72 579 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 FAM71E1Q6IPT2 247 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 RPUSD3Q6P087 351 aaKnown RBP13.12□□□□□ -0.31
TPM4-205ENST00000586833 OPN5Q6U736 354 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 TICAM1Q8IUC6 712 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 TAGAPQ8N103 731 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 ARMC10Q8N2F6 343 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 VWA5B2Q8N398 1253 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 SLC15A4Q8N697 577 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 ZNF721Q8TF20 911 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 ASB15Q8WXK1 588 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 MTERF3Q96E29 417 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 FCRL1Q96LA6 429 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 ZBTB20Q9HC78 741 aaPredicted RBP13.12□□□□□ -0.31
TPM4-205ENST00000586833 INTS9Q9NV88 658 aaKnown RBP13.12□□□□□ -0.31
TPM4-205ENST00000586833 ATAD3AQ9NVI7 634 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 LRFN1Q9P244 771 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 MYOTQ9UBF9 498 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 ERVK-11Q9UQG0 969 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 PCDHGB6Q9Y5F9 930 aa13.12□□□□□ -0.31
TPM4-205ENST00000586833 A8MVJ9 347 aa13.11□□□□□ -0.31
TPM4-205ENST00000586833 ITGA10O75578 1167 aa13.11□□□□□ -0.31
TPM4-205ENST00000586833 HLCSP50747 726 aa13.11□□□□□ -0.31
TPM4-205ENST00000586833 NRG3P56975 720 aa13.11□□□□□ -0.31
TPM4-205ENST00000586833 PSPHP78330 225 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms