RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, human

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF540-204	ENST00000586792	ZRANB3	Q5FWF4	1079 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	AARS2	Q5JTZ9	985 aa	Known RBP	4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	FNBP1L	Q5T0N5	605 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	FAM182A	Q5T1J6	154 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	GPRC6A	Q5T6X5	926 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	AADACL4	Q5VUY2	407 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	ANKRD16	Q6P6B7	361 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	KLHL35	Q6PF15	583 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	LINC00696	Q6ZRV3	163 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	TMPRSS9	Q7Z410	1059 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	AMZ2	Q86W34	360 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	FBXO39	Q8N4B4	442 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	NRAC	Q8N912	160 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	ZNF248	Q8NDW4	579 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	OR4K2	Q8NGD2	314 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	ZNF398	Q8TD17	642 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	SLC37A2	Q8TED4	501 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	C1orf54	Q8WWF1	131 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	KCNE4	Q8WWG9	221 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	SLC5A11	Q8WWX8	675 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	PATE1	Q8WXA2	126 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	CPT1B	Q92523	772 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	RSC1A1	Q92681	617 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	FKBP10	Q96AY3	582 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	ATXN7L3B	Q96GX2	97 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	CLPTM1L	Q96KA5	538 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	ZNF578	Q96N58	590 aa	Predicted RBP	4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	RUFY1	Q96T51	708 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	COPS8	Q99627	209 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	TIMM29	Q9BSF4	260 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	FUZ	Q9BT04	418 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	TSSK1B	Q9BXA7	367 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	SLC5A7	Q9GZV3	580 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	SLC25A18	Q9H1K4	315 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	MRPL46	Q9H2W6	279 aa	Known RBP	4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	TP63	Q9H3D4	680 aa	Predicted RBP	4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	RDH14	Q9HBH5	336 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	G6PC2	Q9NQR9	355 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	IL17C	Q9P0M4	197 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	DKK4	Q9UBT3	224 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	PPIE	Q9UNP9	301 aa	Known RBP	4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	KCNK6	Q9Y257	313 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	DNAJC16	Q9Y2G8	782 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	ARL5A	Q9Y689	179 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792		U3KQA8	63 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	TDRD6	O60522	2096 aa	Known RBP	4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	SPTBN4	Q9H254	2564 aa		4.48	□□□□□ -1.69
ZNF540-204	ENST00000586792	ZNF106	Q9H2Y7	1883 aa	Known RBP	4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	CACNA1A	O00555	2505 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792		A0A1W2PQM1	296 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	GLOD5	A6NK44	160 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	EIF4E1B	A6NMX2	242 aa	Known RBP	4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	SRRM3	A6NNA2	597 aa	Predicted RBP	4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792		H0YIV9	168 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	MYO1C	O00159	1063 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	PGRMC1	O00264	195 aa	Known RBP	4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	PFDN6	O15212	129 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	CD3EAP	O15446	510 aa	Known RBP	4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	HNRNPR	O43390	633 aa	Known RBP	4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	GMFG	O60234	142 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	UGT1A9	O60656	530 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	RASSF9	O75901	435 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	ALPL	P05186	524 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	ZNF7	P17097	686 aa	Predicted RBP	4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	AMD1	P17707	334 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	UGT1A6	P19224	532 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	UGT1A1	P22309	533 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	UGT1A4	P22310	534 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	ADRA1A	P35348	466 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	UGT1A3	P35503	534 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	UGT1A5	P35504	534 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	MAGEA4	P43358	317 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	CPA2	P48052	419 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	CAMLG	P49069	296 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	RPS6KA3	P51812	740 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	UCN	P55089	124 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	TMPRSS3	P57727	454 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	OR1D5	P58170	312 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	PRAME	P78395	509 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	CBX1	P83916	185 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	REL	Q04864	619 aa	Predicted RBP	4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	MGAT2	Q10469	447 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	TBL3	Q12788	808 aa	Known RBP	4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	SLC13A2	Q13183	592 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	TUBB3	Q13509	450 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	TRA2A	Q13595	282 aa	Known RBP eCLIP	4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	RAB32	Q13637	225 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	HABP2	Q14520	560 aa	Predicted RBP	4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	TBCC	Q15814	346 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	STK11	Q15831	433 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	GPR33	Q49SQ1	333 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	LRRC23	Q53EV4	343 aa	Predicted RBP	4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	FASTKD1	Q53R41	847 aa	Known RBP	4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	KCTD16	Q68DU8	428 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	SLC25A24	Q6NUK1	477 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	CYB5D1	Q6P9G0	228 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	RANBP10	Q6VN20	620 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	DET1	Q7L5Y6	550 aa		4.47	□□□□□ -1.69
ZNF540-204	ENST00000586792	NLRP9	Q7RTR0	991 aa		4.47	□□□□□ -1.69

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