RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 PRSS23O95084 383 aa19.26■□□□□ 0.67
ATG4D-204ENST00000586417 LDLRP01130 860 aa19.26■□□□□ 0.67
ATG4D-204ENST00000586417 NCBP2P52298 156 aaKnown RBP eCLIP19.26■□□□□ 0.67
ATG4D-204ENST00000586417 RBBP4Q09028 425 aa19.26■□□□□ 0.67
ATG4D-204ENST00000586417 ZNF574Q6ZN55 896 aaPredicted RBP19.26■□□□□ 0.67
ATG4D-204ENST00000586417 GALNT4Q8N4A0 578 aa19.26■□□□□ 0.67
ATG4D-204ENST00000586417 ZNF681Q96N22 645 aa19.26■□□□□ 0.67
ATG4D-204ENST00000586417 BBS4Q96RK4 519 aa19.26■□□□□ 0.67
ATG4D-204ENST00000586417 RAB33BQ9H082 229 aa19.26■□□□□ 0.67
ATG4D-204ENST00000586417 LRRN3Q9H3W5 708 aa19.26■□□□□ 0.67
ATG4D-204ENST00000586417 EPB41L1Q9H4G0 881 aa19.26■□□□□ 0.67
ATG4D-204ENST00000586417 SLC22A7Q9Y694 548 aa19.26■□□□□ 0.67
ATG4D-204ENST00000586417 SAC3D1A6NKF1 404 aa19.25■□□□□ 0.67
ATG4D-204ENST00000586417 ZNF10P21506 573 aaPredicted RBP19.25■□□□□ 0.67
ATG4D-204ENST00000586417 SNAP47Q5SQN1 464 aa19.25■□□□□ 0.67
ATG4D-204ENST00000586417 INTS11Q5TA45 600 aaKnown RBP19.25■□□□□ 0.67
ATG4D-204ENST00000586417 CBLL1Q75N03 491 aa19.25■□□□□ 0.67
ATG4D-204ENST00000586417 MCATQ8IVS2 390 aaKnown RBP19.25■□□□□ 0.67
ATG4D-204ENST00000586417 OR10Q1Q8NGQ4 319 aa19.25■□□□□ 0.67
ATG4D-204ENST00000586417 TCTN2Q96GX1 697 aa19.25■□□□□ 0.67
ATG4D-204ENST00000586417 NTN4Q9HB63 628 aa19.25■□□□□ 0.67
ATG4D-204ENST00000586417 STARD5Q9NSY2 213 aa19.25■□□□□ 0.67
ATG4D-204ENST00000586417 IGHV5-51A0A0C4DH38 117 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 H0YJX3 145 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 UPK1AO00322 258 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 SOCS2O14508 198 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 ACOX3O15254 700 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 CLOCKO15516 846 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 GALR3O60755 368 aaPredicted RBP19.24■□□□□ 0.67
ATG4D-204ENST00000586417 ARAFP10398 606 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 UQCRBP14927 111 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 BUD31P41223 144 aaPredicted RBP19.24■□□□□ 0.67
ATG4D-204ENST00000586417 GABRA4P48169 554 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 COL9A2Q14055 689 aaPredicted RBP19.24■□□□□ 0.67
ATG4D-204ENST00000586417 CCDC157Q569K6 752 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 ZC3H12BQ5HYM0 836 aaKnown RBP19.24■□□□□ 0.67
ATG4D-204ENST00000586417 PPP4R4Q6NUP7 873 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 WDR74Q6RFH5 385 aaPredicted RBP19.24■□□□□ 0.67
ATG4D-204ENST00000586417 C6orf120Q7Z4R8 191 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 ZFP28Q8NHY6 868 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 ZDHHC12Q96GR4 267 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 CSF3RQ99062 836 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 YY1AP1Q9H869 796 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 LYRM4Q9HD34 91 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 OAZ3Q9UMX2 235 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 ENTPD4Q9Y227 616 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 TLCD2A6NGC4 264 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 ZNF860A6NHJ4 632 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 TMEM229AB2RXF0 380 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 CPNE6O95741 557 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 ZNF682O95780 498 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 SEMG1P04279 462 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 C8orf89P0DMQ9 161 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 CSNK2A2P19784 350 aaPredicted RBP19.24■□□□□ 0.67
ATG4D-204ENST00000586417 CPN2P22792 545 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 MAGEA2P43356 314 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 CCT3P49368 545 aaKnown RBP19.24■□□□□ 0.67
ATG4D-204ENST00000586417 RPS26P62854 115 aaKnown RBP19.24■□□□□ 0.67
ATG4D-204ENST00000586417 OLR1P78380 273 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 SQSTM1Q13501 440 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 PRTGQ2VWP7 1150 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 SPDYE7PQ495Y7 208 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 TMEM64Q6YI46 380 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 ZBTB49Q6ZSB9 765 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 EIF3MQ7L2H7 374 aaKnown RBP19.24■□□□□ 0.67
ATG4D-204ENST00000586417 PLXDC1Q8IUK5 500 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 SHISA5Q8N114 240 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 HORMAD2Q8N7B1 307 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 ZNF597Q96LX8 424 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 VCXQ9H320 206 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 SERHL2Q9H4I8 314 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 ZNF639Q9UID6 485 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 RPS6KA6Q9UK32 745 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 NAALAD2Q9Y3Q0 740 aa19.24■□□□□ 0.67
ATG4D-204ENST00000586417 MN1Q10571 1320 aaPredicted RBP19.24■□□□□ 0.67
ATG4D-204ENST00000586417 C7orf72A4D263 438 aa19.23■□□□□ 0.67
ATG4D-204ENST00000586417 A8MU76 341 aa19.23■□□□□ 0.67
ATG4D-204ENST00000586417 GFRA3O60609 400 aa19.23■□□□□ 0.67
ATG4D-204ENST00000586417 DEAF1O75398 565 aaPredicted RBP19.23■□□□□ 0.67
ATG4D-204ENST00000586417 HOXB6P17509 224 aaKnown RBP19.23■□□□□ 0.67
ATG4D-204ENST00000586417 PTGER1P34995 402 aa19.23■□□□□ 0.67
ATG4D-204ENST00000586417 FEN1P39748 380 aaKnown RBP19.23■□□□□ 0.67
ATG4D-204ENST00000586417 PRIM2P49643 509 aa19.23■□□□□ 0.67
ATG4D-204ENST00000586417 DSTNP60981 165 aa19.23■□□□□ 0.67
ATG4D-204ENST00000586417 SCARB2Q14108 478 aa19.23■□□□□ 0.67
ATG4D-204ENST00000586417 NRF1Q16656 503 aa19.23■□□□□ 0.67
ATG4D-204ENST00000586417 ZNF630Q2M218 657 aaPredicted RBP19.23■□□□□ 0.67
ATG4D-204ENST00000586417 CCDC116Q8IYX3 515 aa19.23■□□□□ 0.67
ATG4D-204ENST00000586417 DEFB124Q8NES8 71 aa19.23■□□□□ 0.67
ATG4D-204ENST00000586417 NFKBIDQ8NI38 313 aa19.23■□□□□ 0.67
ATG4D-204ENST00000586417 ZNF285Q96NJ3 590 aa19.23■□□□□ 0.67
ATG4D-204ENST00000586417 CDC6Q99741 560 aa19.23■□□□□ 0.67
ATG4D-204ENST00000586417 BDH2Q9BUT1 245 aa19.23■□□□□ 0.67
ATG4D-204ENST00000586417 PRDM9Q9NQV7 894 aa19.23■□□□□ 0.67
ATG4D-204ENST00000586417 MS4A12Q9NXJ0 267 aa19.23■□□□□ 0.67
ATG4D-204ENST00000586417 CNOT1A5YKK6 2376 aaKnown RBP19.23■□□□□ 0.67
ATG4D-204ENST00000586417 PDLIM1O00151 329 aa19.22■□□□□ 0.67
ATG4D-204ENST00000586417 NTN3O00634 580 aaPredicted RBP19.22■□□□□ 0.67
ATG4D-204ENST00000586417 SRPX2O60687 465 aaPredicted RBP19.22■□□□□ 0.67
ATG4D-204ENST00000586417 GP1BAP07359 652 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms