RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 ZNF682O95780 498 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 TBX6O95947 436 aaPredicted RBP5.83□□□□□ -1.48
LIG3-206ENST00000586058 IFI6P09912 130 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 ZNF806P0C7X5 589 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 GIMD1P0DJR0 217 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 C8orf89P0DMQ9 161 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 SMIM10L1P0DMW3 83 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 RAP2AP10114 183 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 CDK4P11802 303 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 CPMP14384 443 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 ANPEPP15144 967 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 ATP6V1B2P21281 511 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 AGXTP21549 392 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 ACP1P24666 158 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 FASP25445 335 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 SLC7A1P30825 629 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 PCGF2P35227 344 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 MSX2P35548 267 aaPredicted RBP5.83□□□□□ -1.48
LIG3-206ENST00000586058 SOX11P35716 441 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 FEN1P39748 380 aaKnown RBP5.83□□□□□ -1.48
LIG3-206ENST00000586058 FRKP42685 505 aaPredicted RBP5.83□□□□□ -1.48
LIG3-206ENST00000586058 XCR1P46094 333 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 ERFP50548 548 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 XKP51811 444 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 ARHGDIAP52565 204 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 CRISP3P54108 245 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 PRKAG1P54619 331 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 WNT3P56703 355 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 HSD17B7P56937 341 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 PCBP4P57723 403 aaKnown RBP5.83□□□□□ -1.48
LIG3-206ENST00000586058 CCL7P80098 99 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 SIM1P81133 766 aaPredicted RBP5.83□□□□□ -1.48
LIG3-206ENST00000586058 E2F1Q01094 437 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 FOLH1Q04609 750 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 OCA2Q04671 838 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 GAB1Q13480 694 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 SQSTM1Q13501 440 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 CCNIQ14094 377 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 SCARB2Q14108 478 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 SELPLGQ14242 412 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 TRIP10Q15642 601 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 GPR19Q15760 415 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 PRTGQ2VWP7 1150 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 GRAMD1BQ3KR37 738 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 GTDC1Q4AE62 458 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 PERM1Q5SV97 790 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.83□□□□□ -1.48
LIG3-206ENST00000586058 IRAK1BP1Q5VVH5 260 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 CPZQ66K79 652 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 TMEM107Q6UX40 140 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 CEACAM20Q6UY09 585 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 RBM44Q6ZP01 1051 aaKnown RBP5.83□□□□□ -1.48
LIG3-206ENST00000586058 FKBP9P1Q75LS8 142 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 PATL1Q86TB9 770 aaKnown RBP5.83□□□□□ -1.48
LIG3-206ENST00000586058 RNF130Q86XS8 419 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 SPPL2CQ8IUH8 684 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 NAXDQ8IW45 347 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 GALNT12Q8IXK2 581 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 CCDC116Q8IYX3 515 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 PQLC1Q8N2U9 271 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 METTL25Q8N6Q8 603 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 AGBL5Q8NDL9 886 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 NUP43Q8NFH3 380 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 OR2I1PQ8NGU4 316 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 FBXO30Q8TB52 745 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 ADAMTS15Q8TE58 950 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 TBC1D20Q96BZ9 403 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 NEURL3Q96EH8 262 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 RBM18Q96H35 190 aaKnown RBP5.83□□□□□ -1.48
LIG3-206ENST00000586058 PEX11GQ96HA9 241 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 SMIM10Q96HG1 83 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 MAGED4Q96JG8 741 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 ZNF578Q96N58 590 aaPredicted RBP5.83□□□□□ -1.48
LIG3-206ENST00000586058 AMDHD1Q96NU7 426 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 OR6C1Q96RD1 312 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 CMKLR1Q99788 373 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 BDH2Q9BUT1 245 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 TRIM8Q9BZR9 551 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 GLIPR2Q9H4G4 154 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 Q9H521 79 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 MAGIXQ9H6Y5 334 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 CAAP1Q9H8G2 361 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 GORASP2Q9H8Y8 452 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 ZNF304Q9HCX3 659 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 C8orf4Q9NR00 106 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 C14orf105Q9NVL8 296 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 TOR4AQ9NXH8 423 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 GPN3Q9UHW5 284 aaPredicted RBP5.83□□□□□ -1.48
LIG3-206ENST00000586058 ACSL6Q9UKU0 697 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 ATXN7L1Q9ULK2 861 aaPredicted RBP5.83□□□□□ -1.48
LIG3-206ENST00000586058 MAP4K5Q9Y4K4 846 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 MMACHCQ9Y4U1 282 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 V9GYQ6 96 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 GON4LQ3T8J9 2241 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 COL27A1Q8IZC6 1860 aaPredicted RBP5.83□□□□□ -1.48
LIG3-206ENST00000586058 IGHV5-10-1A0A0J9YXX1 117 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 TCRBV3S1A0A5B6 114 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 EFCAB7A8K855 629 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 C9J4A7 227 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 ACOT8O14734 319 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms