RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	MSGN1	A6NI15	193 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SLC9B1P1	A6NJY1	282 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	HHLA1	C9JL84	531 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	RNF103	O00237	685 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SURF4	O15260	269 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	MTRF1	O75570	445 aa	Known RBP	3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	AKAP3	O75969	853 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	NXPH2	O95156	264 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	IGLV1-44	P01699	117 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	MT-ND3	P03897	115 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SFTPB	P07988	381 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SBK2	P0C263	348 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	P4HA1	P13674	534 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	NKX2-1	P43699	371 aa	Predicted RBP	3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	OR3A2	P47893	321 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SST	P61278	116 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SNRPD1	P62314	119 aa	Known RBP	3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	IRX4	P78413	519 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	GCNT1	Q02742	428 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	GABPA	Q06546	454 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	LRRC26	Q2I0M4	334 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	HLA-B	Q31612	363 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TMEM30B	Q3MIR4	351 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CCDC92	Q53HC0	331 aa	Predicted RBP	3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PODNL1	Q6PEZ8	512 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ZER1	Q7Z7L7	766 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	AQP12A	Q8IXF9	295 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PEX5L	Q8IYB4	626 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	LEMD2	Q8NC56	503 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TRIM58	Q8NG06	486 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SEPT8	Q92599	483 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SNX21	Q969T3	373 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	GMPPA	Q96IJ6	420 aa	Predicted RBP	3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	RBM41	Q96IZ5	413 aa	Known RBP	3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PCDHB18P	Q96TA0	734 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SPAG8	Q99932	426 aa	Predicted RBP	3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	UBAC1	Q9BSL1	405 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SHARPIN	Q9H0F6	387 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	THAP9	Q9H5L6	903 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ZNF696	Q9H7X3	374 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	MRPL17	Q9NRX2	175 aa	Known RBP	3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	MAN2C1	Q9NTJ4	1040 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TRIM10	Q9UDY6	481 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	LNPEP	Q9UIQ6	1025 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	HOOK1	Q9UJC3	728 aa	Known RBP	3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SATB2	Q9UPW6	733 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TDRKH	Q9Y2W6	561 aa	Known RBP	3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	MRPS2	Q9Y399	296 aa	Known RBP	3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	HBS1L	Q9Y450	684 aa	Known RBP	3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SETX	Q7Z333	2677 aa	Known RBP	3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	DOCK2	Q92608	1830 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	KMT2B	Q9UMN6	2715 aa	Predicted RBP	3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CLSPN	Q9HAW4	1339 aa		3.18	□□□□□ -1.9
PPP4R1-229	ENST00000584754	MYH2	Q9UKX2	1941 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	WDFY3	Q8IZQ1	3526 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CEP295	Q9C0D2	2601 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ZZEF1	O43149	2961 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	RPAP1	Q9BWH6	1393 aa	Predicted RBP	3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SYCE3	A1L190	88 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ANTXRL	A6NF34	631 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ANKDD1B	A6NHY2	528 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CXCL11	O14625	94 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CHEK1	O14757	476 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SSX5	O60225	188 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	KIF5C	O60282	957 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TRIM49	P0CI25	452 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TRIM49C	P0CI26	452 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	MYOG	P15173	224 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	FOSL2	P15408	326 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TYMP	P19971	482 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CYP3A5	P20815	502 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	GIF	P27352	417 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SERPINB6	P35237	376 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PAX9	P55771	341 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	KCNK10	P57789	538 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ERVK-16	P61578	105 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CDKL1	Q00532	357 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PPP2R5C	Q13362	524 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SMC1A	Q14683	1233 aa	Known RBP	3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	LASP1	Q14847	261 aa	Known RBP	3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	FAM106A	Q4KMX7	169 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	XKR3	Q5GH77	459 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SLC25A53	Q5H9E4	307 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	DDI2	Q5TDH0	399 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	FKBP1C	Q5VVH2	108 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PLPP4	Q5VZY2	271 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ZNF776	Q68DI1	518 aa	Predicted RBP	3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	APOBEC3H	Q6NTF7	200 aa	Known RBP	3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PLBD1	Q6P4A8	553 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	DHRS11	Q6UWP2	260 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TRMT11	Q7Z4G4	463 aa	Known RBP	3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ZNF410	Q86VK4	478 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	LACC1	Q8IV20	430 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	THEM5	Q8N1Q8	247 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TEX26	Q8N6G2	289 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TCEANC	Q8N8B7	351 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	LRTM2	Q8N967	370 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SIDT2	Q8NBJ9	832 aa	Known RBP	3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	OR8H1	Q8NGG4	311 aa		3.17	□□□□□ -1.9
PPP4R1-229	ENST00000584754	LRR1	Q96L50	414 aa		3.17	□□□□□ -1.9

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