RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 PROSER1Q86XN7 944 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 LACC1Q8IV20 430 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 CATSPER1Q8NEC5 780 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 THAP11Q96EK4 314 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 HSPBAP1Q96EW2 488 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 CNRIP1Q96F85 164 aaPredicted RBP9.72□□□□□ -0.85
RFFL-212ENST00000584655 SLC35G5Q96KT7 338 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 AMBRA1Q9C0C7 1298 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 TMEM9Q9P0T7 183 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 ABCD2Q9UBJ2 740 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 DUSP12Q9UNI6 340 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.72□□□□□ -0.85
RFFL-212ENST00000584655 ATMQ13315 3056 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 PLXND1Q9Y4D7 1925 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 PSMD11O00231 422 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 SLC22A2O15244 555 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 PLRG1O43660 514 aaKnown RBP9.72□□□□□ -0.85
RFFL-212ENST00000584655 CLCN2P51788 898 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 CD47Q08722 323 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 ATG9BQ674R7 924 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 OSBPL11Q9BXB4 747 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 ZNF556Q9HAH1 456 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 GIMAP4Q9NUV9 329 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 ERVK-18Q9QC07 812 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 TMCO1Q9UM00 188 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 CHD8Q9HCK8 2581 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 NCOR2Q9Y618 2525 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 LRRTM2O43300 516 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 F10P00742 488 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 DRD1P21728 446 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 CXCR2P25025 360 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 MVKQ03426 396 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 CHRNEQ04844 493 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 ADAMTSL4Q6UY14 1074 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 PIWIL3Q7Z3Z3 882 aaKnown RBP9.72□□□□□ -0.85
RFFL-212ENST00000584655 ZFP41Q8N8Y5 198 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 TEX101Q9BY14 249 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 MS4A8Q9BY19 250 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 DCAF13Q9NV06 445 aaKnown RBP9.72□□□□□ -0.85
RFFL-212ENST00000584655 TVP23BQ9NYZ1 205 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 OR10H1Q9Y4A9 318 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 N6AMT1Q9Y5N5 214 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 TCRBV5S2A0A599 114 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 J3QRK9 145 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 MASP2O00187 686 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 GADD45GO95257 159 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 H6PDO95479 791 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 ANGPTL1O95841 491 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 TBX6O95947 436 aaPredicted RBP9.72□□□□□ -0.85
RFFL-212ENST00000584655 HIST1H1TP22492 207 aaPredicted RBP9.72□□□□□ -0.85
RFFL-212ENST00000584655 DPTQ07507 201 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 GPR141Q7Z602 305 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 CSNK1A1LQ8N752 337 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 SGPP1Q9BX95 441 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 SLC35C2Q9NQQ7 365 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 OLAHQ9NV23 265 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 AKAP6Q13023 2319 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 CHURC1-FNTBB4DL54 471 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 ARNTLO00327 626 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 SLC16A5O15375 505 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 NOL3O60936 208 aaKnown RBP9.71□□□□□ -0.85
RFFL-212ENST00000584655 INMTO95050 263 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 CAPGP40121 348 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 GPR4P46093 362 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 STT3AP46977 705 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 FNTBP49356 437 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 RGS1Q08116 209 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 PMS2P3Q13401 168 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 ADRM1Q16186 407 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 ANXA8L1Q5VT79 327 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 C16orf87Q6PH81 154 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 ABRAXAS1Q6UWZ7 409 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 UBE3DQ7Z6J8 389 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 ARMC8Q8IUR7 673 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 GPR65Q8IYL9 337 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 SDR16C5Q8N3Y7 309 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 TMEM52Q8NDY8 209 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 OR10G2Q8NGC3 310 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 OR4N2Q8NGD1 307 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 CDCA3Q99618 268 aaPredicted RBP9.71□□□□□ -0.85
RFFL-212ENST00000584655 TOR4AQ9NXH8 423 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 DNAJB9Q9UBS3 223 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 PTPRSQ13332 1948 aa9.71□□□□□ -0.85
RFFL-212ENST00000584655 DENND4CQ5VZ89 1909 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 TRBV4-1A0A0J9YWV2 114 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 CENPVL1A0A0U1RR11 272 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 LOC100130705A0A1B0GUX0 176 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 ZNF182P17025 639 aaPredicted RBP9.71□□□□□ -0.86
RFFL-212ENST00000584655 SSTR4P31391 388 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 MXD1Q05195 221 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 ZIC1Q15915 447 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 RNF44Q7L0R7 432 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 GALNT12Q8IXK2 581 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 ZFP90Q8TF47 636 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 CDS1Q92903 461 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 UBE2E3Q969T4 207 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 COX14Q96I36 57 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 AICDAQ9GZX7 198 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 CLK4Q9HAZ1 481 aaKnown RBP9.71□□□□□ -0.86
RFFL-212ENST00000584655 WSB2Q9NYS7 404 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms