RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 CARTPTQ16568 116 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 TMEM44Q2T9K0 475 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 C9orf66Q5T8R8 295 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 STEAP1BQ6NZ63 245 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 FBXL22Q6P050 247 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 PLBD1Q6P4A8 553 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 BNIPLQ7Z465 357 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 ADAMTSL2Q86TH1 951 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 SLC25A42Q86VD7 318 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 SLC47A2Q86VL8 602 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 CCDC71Q8IV32 467 aaPredicted RBP4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 LMNTD2Q8IXW0 634 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 LINC00518Q8N0U6 118 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 C4orf32Q8N8J7 132 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 C17orf47Q8NEP4 570 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 OR4Q3Q8NH05 313 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 PNPLA2Q96AD5 504 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 RUFY1Q96T51 708 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 SPAG8Q99932 426 aaPredicted RBP4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 TRPV6Q9H1D0 765 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 TAS2R16Q9NYV7 291 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 VPS54Q9P1Q0 977 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 ERVK-18Q9QC07 812 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 TSPAN16Q9UKR8 245 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 MRPS2Q9Y399 296 aaKnown RBP4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 A0A1B0GTH9 108 aa4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 ACOD1A6NK06 481 aa4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 K7ERI5 159 aa4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 FRAT2O75474 233 aaPredicted RBP4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 IGHG1P01857 330 aa4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 STMN1P16949 149 aa4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 TNFRSF4P43489 277 aa4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 EMC2Q15006 297 aa4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 DDI2Q5TDH0 399 aa4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 LIPJQ5W064 366 aa4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 EMBQ6PCB8 327 aa4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 DLEU7Q6UYE1 221 aa4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 MYPOPQ86VE0 399 aaPredicted RBP4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 PHC2Q8IXK0 858 aa4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 SAMD12Q8N8I0 201 aa4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 OR52E1Q8NGJ3 308 aa4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 OR4F5Q8NH21 305 aa4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 HSD17B14Q9BPX1 270 aa4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 DCTN5Q9BTE1 182 aa4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 TRIM6Q9C030 488 aaPredicted RBP4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 ABCG8Q9H221 673 aa4.48□□□□□ -1.69
SMARCE1-219ENST00000583294 RPGRIP1LQ68CZ1 1315 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 CHEK1O14757 476 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 SH2D1BO14796 132 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 TXNL1O43396 289 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 GALR3O60755 368 aaPredicted RBP4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 SLC4A1P02730 911 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 SERPINF2P08697 491 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 HOXD4P09016 255 aaPredicted RBP4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 AHCYP23526 432 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 FCARP24071 287 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 SPRP35270 261 aaPredicted RBP4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 TRIM23P36406 574 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 NLRP11P59045 1033 aaKnown RBP4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 KLF5Q13887 457 aaPredicted RBP4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 UNC50Q53HI1 259 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 TCHHL1Q5QJ38 904 aaPredicted RBP4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 LEMD1Q68G75 181 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 HIST2H2AA3Q6FI13 130 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 RAB12Q6IQ22 244 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 REG3GQ6UW15 175 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 BATF2Q8N1L9 274 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 LEMD2Q8NC56 503 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 FBXO25Q8TCJ0 367 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 FAM222BQ8WU58 562 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 TAF15Q92804 592 aaKnown RBP eCLIP4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 RAB11FIP5Q9BXF6 653 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 SYTL2Q9HCH5 934 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 ANO10Q9NW15 660 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 TRIM10Q9UDY6 481 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 IL19Q9UHD0 177 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 SLC6A5Q9Y345 797 aa4.47□□□□□ -1.69
SMARCE1-219ENST00000583294 IGHV3-16A0A0C4DH30 117 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 A0A0U1RRA0 63 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 SLC9B1P1A6NJY1 282 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 TSPAN2O60636 221 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 LRP3O75074 770 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 SYNGR4O95473 234 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 SEMA4FO95754 770 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 FCER2P06734 321 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 HCKP08631 526 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 KRT5P13647 590 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 PRELPP51888 382 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 ZNF131P52739 623 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 CDKL1Q00532 357 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 ZFP36L1Q07352 338 aaKnown RBP4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 WASHC5Q12768 1159 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 LCE1FQ5T754 118 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 AGAP7PQ5VUJ5 663 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 C1orf186Q6ZWK4 172 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 ASRGL1Q7L266 308 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 OR2L2Q8NH16 312 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 CCDC47Q96A33 483 aaKnown RBP4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 RAB3CQ96E17 227 aa4.46□□□□□ -1.7
SMARCE1-219ENST00000583294 TMEM237Q96Q45 408 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms