RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 TP53I11O14683 189 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 TBX6O95947 436 aaPredicted RBP12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 COX7A2P14406 83 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 CERS1P27544 350 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 GSTM2P28161 218 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 STT3AP46977 705 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 MTTPP55157 894 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 RPS4XP62701 263 aaKnown RBP12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 RPS6KA2Q15349 733 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 BEX5Q5H9J7 111 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 CASC4Q6P4E1 433 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 ZNF474Q6S9Z5 364 aaPredicted RBP12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 TMPRSS11BQ86T26 416 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 PACS2Q86VP3 889 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 MYO1HQ8N1T3 1032 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 CCDC89Q8N998 374 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 OR2L5Q8NG80 312 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 STARD4Q96DR4 205 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 TMEM41AQ96HV5 264 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 FBXL20Q96IG2 436 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 TMEM204Q9BSN7 226 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 LYRM4Q9HD34 91 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.57□□□□□ -0.41e-8■■□□□ 13.8
CSNK1D-219ENST00000581660 DYRK1BQ9Y463 629 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 MAD1L1Q9Y6D9 718 aa12.57□□□□□ -0.4
CSNK1D-219ENST00000581660 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 C16orf97H3BN30 126 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 HS3ST1O14792 307 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 SPRY1O43609 319 aaPredicted RBP12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 LDB3O75112 727 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 THBS1P07996 1170 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 PTPN6P29350 595 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 SLC1A2P43004 574 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 SLC6A12P48065 614 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 TERF1P54274 439 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 SEL1L2Q5TEA6 688 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 BICRALQ6AI39 1079 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 TIGD3Q6B0B8 471 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 ABHD17CQ6PCB6 329 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 C22orf34Q6ZV56 151 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 ZNF550Q7Z398 422 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 FAM83FQ8NEG4 500 aaPredicted RBP12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 SPPL2AQ8TCT8 520 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 CTHRC1Q96CG8 243 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 ART5Q96L15 291 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 FAM111AQ96PZ2 611 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 SLC39A3Q9BRY0 314 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 TSGA10Q9BZW7 698 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 WWTR1Q9GZV5 400 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 LPAR3Q9UBY5 353 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 GUCA1BQ9UMX6 200 aa12.56□□□□□ -0.4
CSNK1D-219ENST00000581660 FRG2CA6NGY1 282 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 HRKO00198 91 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 KLF4O43474 513 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 HCRTR2O43614 444 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 CLEC3AO75596 197 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 POU2F1P14859 743 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 HPDP32754 393 aaPredicted RBP12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 GCKP35557 465 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 MASP1P48740 699 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 PLA2G16P53816 162 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 CDK16Q00536 496 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 OCRLQ01968 901 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 ID2Q02363 134 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 FUT7Q11130 342 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 THOC5Q13769 683 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 EBPQ15125 230 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 TRIM40Q6P9F5 258 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 PLXDC2Q6UX71 529 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 C4orf22Q6V702 233 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 YRDCQ86U90 279 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 THOC6Q86W42 341 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 LMNTD2Q8IXW0 634 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 TAGAPQ8N103 731 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 LINGO1Q96FE5 620 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 TRMT61AQ96FX7 289 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 ZC3HAV1LQ96H79 300 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 GAL3ST4Q96RP7 486 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 BEX2Q9BXY8 128 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 REXO4Q9GZR2 422 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 SLCO5A1Q9H2Y9 848 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 LRTM1Q9HBL6 345 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 TEX10Q9NXF1 929 aaPredicted RBP12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 KCNE2Q9Y6J6 123 aa12.55□□□□□ -0.4
CSNK1D-219ENST00000581660 TCRBV7S3A2A0A539 114 aa12.54□□□□□ -0.4
CSNK1D-219ENST00000581660 PABPN1LA6NDY0 278 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-219ENST00000581660 CAPN14A8MX76 684 aa12.54□□□□□ -0.4
CSNK1D-219ENST00000581660 KCNAB3O43448 404 aa12.54□□□□□ -0.4
CSNK1D-219ENST00000581660 DYRK3O43781 588 aa12.54□□□□□ -0.4
CSNK1D-219ENST00000581660 SMNDC1O75940 238 aaKnown RBP eCLIP12.54□□□□□ -0.44e-6■■■■□ 24.8
CSNK1D-219ENST00000581660 THBDP07204 575 aa12.54□□□□□ -0.4
CSNK1D-219ENST00000581660 ENO2P09104 434 aaPredicted RBP12.54□□□□□ -0.4
CSNK1D-219ENST00000581660 TPSB2P20231 275 aa12.54□□□□□ -0.4
CSNK1D-219ENST00000581660 GMPRP36959 345 aa12.54□□□□□ -0.4
CSNK1D-219ENST00000581660 CASP3P42574 277 aa12.54□□□□□ -0.4
CSNK1D-219ENST00000581660 KCNJ1P48048 391 aa12.54□□□□□ -0.4
CSNK1D-219ENST00000581660 FBXW4P57775 412 aa12.54□□□□□ -0.4
CSNK1D-219ENST00000581660 BASP1P80723 227 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-219ENST00000581660 DHX34Q14147 1143 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms