RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 MLPHQ9BV36 600 aaPredicted RBP2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 NUSAP1Q9BXS6 441 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 ZCCHC17Q9NP64 241 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 TNFSF11O14788 317 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 CRCPO75575 148 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 PDGFBP01127 241 aaPredicted RBP2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 NUDT17P0C025 328 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 MAGEA9P43362 315 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 TNFRSF4P43489 277 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 FNTAP49354 379 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 MEOX2P50222 304 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 SLC25A1P53007 311 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 CXCL6P80162 114 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 PAX2Q02962 417 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 GABPAQ06546 454 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 OR1C1Q15619 314 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 FAM219BQ5XKK7 198 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 ITIH5Q86UX2 942 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 ARL14Q8N4G2 192 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 RELL2Q8NC24 303 aaPredicted RBP2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 OR7G3Q8NG95 312 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 VN1R17PQ8TDU5 208 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 AP2M1Q96CW1 435 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 SNRNP40Q96DI7 357 aaKnown RBP2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 PANX3Q96QZ0 392 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 S1PR3Q99500 378 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 TTYH2Q9BSA4 534 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 TMEM206Q9H813 350 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 ADGRL4Q9HBW9 690 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 SLC25A19Q9HC21 320 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 GDF3Q9NR23 364 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 MIS18AQ9NYP9 233 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 SPG21Q9NZD8 308 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 SEC14L4Q9UDX3 406 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 MLXQ9UH92 298 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 NRBP1Q9UHY1 535 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 ERVK-19Q9WJR5 959 aa2.28□□□□□ -2.04
SMCHD1-206ENST00000581631 K7ERI5 159 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 TTI1O43156 1089 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 CPNE6O95741 557 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 EPOP01588 193 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 HSP90AA1P07900 732 aaKnown RBP2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 CPA3P15088 417 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 PGAM2P15259 253 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 RGRP47804 291 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 TNFSF10P50591 281 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 MFAP2P55001 183 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 KRTAP10-10P60014 251 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 BFSP1Q12934 665 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 SLC10A1Q14973 349 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 HEPACAMQ14CZ8 416 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 C2orf83Q53S99 150 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 ACER2Q5QJU3 275 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 GBP6Q6ZN66 633 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 GALNTL5Q7Z4T8 443 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 CCDC83Q8IWF9 413 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 NUP93Q8N1F7 819 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 GOLGA5Q8TBA6 731 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 TEKT1Q969V4 418 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 SPATA17Q96L03 361 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 PAXXQ9BUH6 204 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 ST6GALNAC5Q9BVH7 336 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 UTP14AQ9BVJ6 771 aaKnown RBP2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 RNF41Q9H4P4 317 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 ZDHHC6Q9H6R6 413 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 VNN3Q9NY84 501 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 TECRQ9NZ01 308 aaKnown RBP2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 ITM2BQ9Y287 266 aa2.27□□□□□ -2.05
SMCHD1-206ENST00000581631 FAM149AA5PLN7 773 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 TRABD2BA6NFA1 517 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 EFCAB7A8K855 629 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 HDAC3O15379 428 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 CHRNGP07510 517 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 TPBGLP0DKB5 382 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 B4GALT1P15291 398 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 SERPINB6P35237 376 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 ARHGDIAP52565 204 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 NDST1P52848 882 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 KCNK10P57789 538 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 ST8SIA6P61647 398 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 ANKRD20A4Q4UJ75 823 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 ANKRD20A8PQ5CZ79 823 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 ANKRD20A2Q5SQ80 823 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 C9orf129Q5T035 196 aaKnown RBP2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 ANKRD20A1Q5TYW2 823 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 C1orf189Q5VU69 101 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 ANKRD20A3Q5VUR7 823 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 GCNT7Q6ZNI0 430 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 SIAH3Q8IW03 269 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 LAX1Q8IWV1 398 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 OR8H3Q8N146 312 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 FBXO25Q8TCJ0 367 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 CRYGNQ8WXF5 182 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 PIWIL1Q96J94 861 aaKnown RBP2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 CXorf58Q96LI9 332 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 GUCD1Q96NT3 240 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 CCT8L2Q96SF2 557 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 TIGARQ9NQ88 270 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 DNAJC17Q9NVM6 304 aaKnown RBP2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 PRODH2Q9UF12 536 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms