RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 SORBS1Q9BX66 1292 aaKnown RBP19.37■□□□□ 0.69
CCDC42-203ENST00000581598 DDX31Q9H8H2 851 aaKnown RBP19.37■□□□□ 0.69
CCDC42-203ENST00000581598 IPPKQ9H8X2 491 aa19.37■□□□□ 0.69
CCDC42-203ENST00000581598 ZDHHC11Q9H8X9 412 aa19.37■□□□□ 0.69
CCDC42-203ENST00000581598 APCP25054 2843 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 PINLYPA6NC86 204 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 ACOT7O00154 380 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 FOXE1O00358 373 aaPredicted RBP19.36■□□□□ 0.69
CCDC42-203ENST00000581598 PROM1O43490 865 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 DYRK3O43781 588 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 TYROBPO43914 113 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 COX6B1P14854 86 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 CNR1P21554 472 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 CRHR1P34998 444 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 BUD31P41223 144 aaPredicted RBP19.36■□□□□ 0.69
CCDC42-203ENST00000581598 HNRNPH2P55795 449 aaKnown RBP19.36■□□□□ 0.69
CCDC42-203ENST00000581598 RPS13P62277 151 aaKnown RBP19.36■□□□□ 0.69
CCDC42-203ENST00000581598 PLIN5Q00G26 463 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 FOLH1Q04609 750 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 CDSNQ15517 529 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 NDUFAF5Q5TEU4 345 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 PAOXQ6QHF9 649 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 GK5Q6ZS86 529 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 GDF7Q7Z4P5 450 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 GOLGA7Q7Z5G4 137 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 MYLK4Q86YV6 388 aaPredicted RBP19.36■□□□□ 0.69
CCDC42-203ENST00000581598 WDR20Q8TBZ3 569 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 RBM18Q96H35 190 aaKnown RBP19.36■□□□□ 0.69
CCDC42-203ENST00000581598 SENP5Q96HI0 755 aaPredicted RBP19.36■□□□□ 0.69
CCDC42-203ENST00000581598 LYARQ9NX58 379 aaKnown RBP19.36■□□□□ 0.69
CCDC42-203ENST00000581598 TMCO1Q9UM00 188 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 ATG4BQ9Y4P1 393 aa19.36■□□□□ 0.69
CCDC42-203ENST00000581598 A0A0A6YYD5 115 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 LRRC14BA6NHZ5 514 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 CDC40O60508 579 aaKnown RBP eCLIP19.35■□□□□ 0.69
CCDC42-203ENST00000581598 ZNF354AO60765 605 aaPredicted RBP19.35■□□□□ 0.69
CCDC42-203ENST00000581598 GLRA3O75311 464 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 GLSO94925 669 aaPredicted RBP19.35■□□□□ 0.69
CCDC42-203ENST00000581598 TPOP07202 933 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 RBP1P09455 135 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 ALOX15P16050 662 aaPredicted RBP19.35■□□□□ 0.69
CCDC42-203ENST00000581598 GALNSP34059 522 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 BSGP35613 385 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 CPSF6Q16630 551 aaKnown RBP eCLIP19.35■□□□□ 0.69
CCDC42-203ENST00000581598 HYAL4Q2M3T9 481 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 SPRED3Q2MJR0 410 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 TSNAXIP1Q2TAA8 658 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 PIGGQ5H8A4 983 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 C18orf63Q68DL7 685 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 NCCRP1Q6ZVX7 275 aaPredicted RBP19.35■□□□□ 0.69
CCDC42-203ENST00000581598 CD163Q86VB7 1156 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 SLC22A16Q86VW1 577 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 OR4N5Q8IXE1 308 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 ST13P4Q8IZP2 240 aaPredicted RBP19.35■□□□□ 0.69
CCDC42-203ENST00000581598 SLC15A4Q8N697 577 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 FBXL20Q96IG2 436 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 FAM173AQ9BQD7 235 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.35■□□□□ 0.69
CCDC42-203ENST00000581598 CPSF2Q9P2I0 782 aaKnown RBP19.35■□□□□ 0.69
CCDC42-203ENST00000581598 DCDC2Q9UHG0 476 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 ASB4Q9Y574 426 aa19.35■□□□□ 0.69
CCDC42-203ENST00000581598 PHF3Q92576 2039 aaKnown RBP19.35■□□□□ 0.69
CCDC42-203ENST00000581598 STX16-NPEPL1H3BU86 382 aa19.34■□□□□ 0.69
CCDC42-203ENST00000581598 COPEO14579 308 aa19.34■□□□□ 0.69
CCDC42-203ENST00000581598 STX16O14662 325 aa19.34■□□□□ 0.69
CCDC42-203ENST00000581598 SEMA3DO95025 777 aa19.34■□□□□ 0.69
CCDC42-203ENST00000581598 SIX3O95343 332 aaPredicted RBP19.34■□□□□ 0.69
CCDC42-203ENST00000581598 CLDN9O95484 217 aa19.34■□□□□ 0.69
CCDC42-203ENST00000581598 PPIAP62937 165 aaKnown RBP19.34■□□□□ 0.69
CCDC42-203ENST00000581598 PLGLB1Q02325 96 aa19.34■□□□□ 0.69
CCDC42-203ENST00000581598 ZNF750Q32MQ0 723 aa19.34■□□□□ 0.69
CCDC42-203ENST00000581598 C10orf62Q5T681 223 aaPredicted RBP19.34■□□□□ 0.69
CCDC42-203ENST00000581598 TMEM211Q6ICI0 200 aa19.34■□□□□ 0.69
CCDC42-203ENST00000581598 C9orf40Q8IXQ3 194 aa19.34■□□□□ 0.69
CCDC42-203ENST00000581598 DND1Q8IYX4 353 aaKnown RBP19.34■□□□□ 0.69
CCDC42-203ENST00000581598 ACBD4Q8NC06 268 aa19.34■□□□□ 0.69
CCDC42-203ENST00000581598 NTMT1Q9BV86 223 aa19.34■□□□□ 0.69
CCDC42-203ENST00000581598 TTTY12Q9BZ98 90 aa19.34■□□□□ 0.69
CCDC42-203ENST00000581598 TP63Q9H3D4 680 aaPredicted RBP19.34■□□□□ 0.69
CCDC42-203ENST00000581598 IL1RL2Q9HB29 575 aa19.34■□□□□ 0.69
CCDC42-203ENST00000581598 SACM1LQ9NTJ5 587 aa19.34■□□□□ 0.69
CCDC42-203ENST00000581598 FAM53CQ9NYF3 392 aa19.34■□□□□ 0.69
CCDC42-203ENST00000581598 COQ3Q9NZJ6 369 aa19.34■□□□□ 0.69
CCDC42-203ENST00000581598 RNF11Q9Y3C5 154 aa19.34■□□□□ 0.69
CCDC42-203ENST00000581598 HRH3Q9Y5N1 445 aa19.34■□□□□ 0.69
CCDC42-203ENST00000581598 TMPRSS11DO60235 418 aa19.33■□□□□ 0.68
CCDC42-203ENST00000581598 EEDO75530 441 aaKnown RBP19.33■□□□□ 0.68
CCDC42-203ENST00000581598 GPR75O95800 540 aa19.33■□□□□ 0.68
CCDC42-203ENST00000581598 IGHG3P01860 377 aa19.33■□□□□ 0.68
CCDC42-203ENST00000581598 CCT5P48643 541 aa19.33■□□□□ 0.68
CCDC42-203ENST00000581598 SLC18A1P54219 525 aa19.33■□□□□ 0.68
CCDC42-203ENST00000581598 TBL3Q12788 808 aaKnown RBP19.33■□□□□ 0.68
CCDC42-203ENST00000581598 ZNF791Q3KP31 576 aaPredicted RBP19.33■□□□□ 0.68
CCDC42-203ENST00000581598 C3P1Q6ZMU1 363 aa19.33■□□□□ 0.68
CCDC42-203ENST00000581598 DGAT2L6Q6ZPD8 337 aa19.33■□□□□ 0.68
CCDC42-203ENST00000581598 NUDT13Q86X67 352 aa19.33■□□□□ 0.68
CCDC42-203ENST00000581598 PTGR2Q8N8N7 351 aaPredicted RBP19.33■□□□□ 0.68
CCDC42-203ENST00000581598 SLC22A8Q8TCC7 542 aa19.33■□□□□ 0.68
CCDC42-203ENST00000581598 SERPINI1Q99574 410 aa19.33■□□□□ 0.68
CCDC42-203ENST00000581598 SPOCK3Q9BQ16 436 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms