RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 DLG1Q12959 904 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 CALCOCO2Q13137 446 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 SPRED3Q2MJR0 410 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 C18orf63Q68DL7 685 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 MRM1Q6IN84 353 aaKnown RBP9.75□□□□□ -0.85
RFFL-209ENST00000581265 GRHL2Q6ISB3 625 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 SEM1Q6ZVN7 128 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 BIVMQ86UB2 503 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 FBXW8Q8N3Y1 598 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 SPATA3Q8NHX4 192 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 NEIL3Q8TAT5 605 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 NRGNQ92686 78 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 NINJ1Q92982 152 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 EXT2Q93063 718 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 NAPGQ99747 312 aaPredicted RBP9.75□□□□□ -0.85
RFFL-209ENST00000581265 PELOQ9BRX2 385 aaKnown RBP9.75□□□□□ -0.85
RFFL-209ENST00000581265 SORBS1Q9BX66 1292 aaKnown RBP9.75□□□□□ -0.85
RFFL-209ENST00000581265 EXO5Q9H790 373 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 DNAJB12Q9NXW2 375 aaKnown RBP9.75□□□□□ -0.85
RFFL-209ENST00000581265 PSD3Q9NYI0 1048 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 EDARQ9UNE0 448 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 ASB4Q9Y574 426 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 PCDHGA11Q9Y5H2 935 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 DNHD1Q96M86 4753 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 A0A1W2PR48 441 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 CCDC189A1A4V9 331 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 FAM187AA6NFU0 413 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 OR6C76A6NM76 312 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 WASHC1A8K0Z3 465 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 HSPB2A8KAH6 182 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 AHRRA9YTQ3 701 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 SUPT3HB4E1H0 165 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 UBXN8O00124 270 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 TRIM3O75382 744 aaPredicted RBP9.74□□□□□ -0.85
RFFL-209ENST00000581265 SUPT3HO75486 399 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 EPPINO95925 133 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 LTA4HP09960 611 aaKnown RBP9.74□□□□□ -0.85
RFFL-209ENST00000581265 BUD31P41223 144 aaPredicted RBP9.74□□□□□ -0.85
RFFL-209ENST00000581265 KIR2DL3P43628 341 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 RAP1GDS1P52306 607 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 HNRNPH2P55795 449 aaKnown RBP9.74□□□□□ -0.85
RFFL-209ENST00000581265 HERVK_113P63132 956 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 ERVK-8P63133 956 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 MRPS25P82663 173 aaKnown RBP9.74□□□□□ -0.85
RFFL-209ENST00000581265 TNFRSF17Q02223 184 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 CUL3Q13618 768 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 ZNF267Q14586 743 aaPredicted RBP9.74□□□□□ -0.85
RFFL-209ENST00000581265 CEBPEQ15744 281 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 HSPB2Q16082 182 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 NTRK2Q16620 822 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 KBTBD12Q3ZCT8 623 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 TBCELQ5QJ74 424 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 PRAMEF20Q5VT98 475 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 LIPJQ5W064 366 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 RNF111Q6ZNA4 994 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 RAPH1Q70E73 1250 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 SLC29A4Q7RTT9 530 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 MAATS1Q7Z4T9 603 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 WDR53Q7Z5U6 358 aaPredicted RBP9.74□□□□□ -0.85
RFFL-209ENST00000581265 CCDC91Q7Z6B0 441 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 TBC1D1Q86TI0 1168 aaPredicted RBP9.74□□□□□ -0.85
RFFL-209ENST00000581265 CTAGE3PQ8IX95 158 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 ULK2Q8IYT8 1036 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 RNF175Q8N4F7 328 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 TEX9Q8N6V9 391 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 FAM13CQ8NE31 585 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 OR10G3Q8NGC4 313 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 RHEBL1Q8TAI7 183 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 NUDT8Q8WV74 236 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 RIT1Q92963 219 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 TP53INP1Q96A56 240 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 MTERF1Q99551 399 aaKnown RBP9.74□□□□□ -0.85
RFFL-209ENST00000581265 ERVK-6Q9BXR3 956 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 ZNF717Q9BY31 904 aaPredicted RBP9.74□□□□□ -0.85
RFFL-209ENST00000581265 WWTR1Q9GZV5 400 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 DDX31Q9H8H2 851 aaKnown RBP9.74□□□□□ -0.85
RFFL-209ENST00000581265 PRM3Q9NNZ6 103 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 DMRT3Q9NQL9 472 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 RASSF1Q9NS23 344 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 ZNF358Q9NW07 568 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 GRHL1Q9NZI5 618 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 CNOT11Q9UKZ1 510 aaKnown RBP9.74□□□□□ -0.85
RFFL-209ENST00000581265 ERVK-19Q9WJR5 959 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 ACOT9Q9Y305 439 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 IKBKGQ9Y6K9 419 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 MPDZO75970 2070 aa9.74□□□□□ -0.85
RFFL-209ENST00000581265 A0A0A6YYD5 115 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 SYCE1LA8MT33 242 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 CAPN14A8MX76 684 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 H0YIV9 168 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 OR10H2O60403 315 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 UGDHO60701 494 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 CLPSP04118 112 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 C8BP07358 591 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 SLC35E2P0CK97 266 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 ADSLP30566 484 aaPredicted RBP9.73□□□□□ -0.85
RFFL-209ENST00000581265 CEACAM8P31997 349 aaPredicted RBP9.73□□□□□ -0.85
RFFL-209ENST00000581265 BSGP35613 385 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 TIMP3P35625 211 aa9.73□□□□□ -0.85
RFFL-209ENST00000581265 RPS13P62277 151 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms