RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 XKP51811 444 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 UFM1P61960 85 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 AP2B1P63010 937 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 MAP4K2Q12851 820 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 MAPRE2Q15555 327 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 MPEG1Q2M385 716 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 ZNF385BQ569K4 471 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 COQ5Q5HYK3 327 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 MFSD4BQ5TF39 518 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 CPEB2Q7Z5Q1 589 aaKnown RBP9.73□□□□□ -0.85
CCDC47-203ENST00000580986 PPP1R32Q7Z5V6 425 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 ANKRD37Q7Z713 158 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 MRGPREQ86SM8 312 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 FUNDC1Q8IVP5 155 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 SPACA3Q8IXA5 215 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 MMP21Q8N119 569 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 KRTCAP2Q8N6L1 136 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 CCDC197Q8NCU1 140 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 VPS37AQ8NEZ2 397 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 OR14A16Q8NHC5 309 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 DNAJB8Q8NHS0 232 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 SUN3Q8TAQ9 357 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 BCAS4Q8TDM0 211 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 DAZLQ92904 295 aaKnown RBP9.73□□□□□ -0.85
CCDC47-203ENST00000580986 TSLPQ969D9 159 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 CTHRC1Q96CG8 243 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 RBM18Q96H35 190 aaKnown RBP9.73□□□□□ -0.85
CCDC47-203ENST00000580986 ART5Q96L15 291 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 TEX37Q96LM6 180 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 DGAT2Q96PD7 388 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 LPAR4Q99677 370 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 TUBB6Q9BUF5 446 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 DUSP26Q9BV47 211 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 ALOXE3Q9BYJ1 711 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 NMUR2Q9GZQ4 415 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 MYLK2Q9H1R3 596 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 SH3BP4Q9P0V3 963 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 NTMQ9P121 344 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 IL17BQ9UHF5 180 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 CCDC88CQ9P219 2028 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 CFAP47Q6ZTR5 3102 aa9.73□□□□□ -0.85
CCDC47-203ENST00000580986 CELSR3Q9NYQ7 3312 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 APC2O95996 2303 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 A0A087WV62 115 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 IGHV1-45A0A0A0MS14 117 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 C1QTNF9BB2RNN3 333 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 CFLARO15519 480 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 AKAP10O43572 662 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 PLOD3O60568 738 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 SCN2BO60939 215 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 ERAL1O75616 437 aaKnown RBP9.72□□□□□ -0.85
CCDC47-203ENST00000580986 LRATO95237 230 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 HPP00738 406 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 C1QTNF9P0C862 333 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 LAMP1P11279 417 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 COX6A1P12074 109 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 ICAM2P13598 275 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 IL12AP29459 219 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 S100A3P33764 101 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 POLR2JP52435 117 aaKnown RBP9.72□□□□□ -0.85
CCDC47-203ENST00000580986 WNT3P56703 355 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 KCNK10P57789 538 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 OR4D2P58180 307 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 RPS18P62269 152 aaKnown RBP9.72□□□□□ -0.85
CCDC47-203ENST00000580986 TLE3Q04726 772 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 IL10RAQ13651 578 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 EXT1Q16394 746 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 PRICKLE4Q2TBC4 344 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 FAM174BQ3ZCQ3 159 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 SPANXN4Q5MJ08 99 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 BROXQ5VW32 411 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 PLAG1Q6DJT9 500 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 KIRREL2Q6UWL6 708 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 TMEM64Q6YI46 380 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 LRRC69Q6ZNQ3 347 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 RIPOR1Q6ZS17 1223 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 SHISA6Q6ZSJ9 500 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 NDUFAF7Q7L592 441 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 PRSS58Q8IYP2 241 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 ZSCAN1Q8NBB4 408 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 MORN4Q8NDC4 146 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 OR7A2PQ8NGA2 310 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 OR11G2Q8NGC1 345 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 OR8K3Q8NH51 312 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 GOT1L1Q8NHS2 421 aaPredicted RBP9.72□□□□□ -0.85
CCDC47-203ENST00000580986 OR5P2Q8WZ92 322 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 GFM2Q969S9 779 aaKnown RBP9.72□□□□□ -0.85
CCDC47-203ENST00000580986 EXOSC8Q96B26 276 aaKnown RBP9.72□□□□□ -0.85
CCDC47-203ENST00000580986 RNF31Q96EP0 1072 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 FBXL20Q96IG2 436 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 MARK4Q96L34 752 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 CCDC115Q96NT0 180 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 AMDHD1Q96NU7 426 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 LRRC37BQ96QE4 947 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 BBS4Q96RK4 519 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 WDR77Q9BQA1 342 aaPredicted RBP9.72□□□□□ -0.85
CCDC47-203ENST00000580986 SEMA4CQ9C0C4 833 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 CXorf21Q9HAI6 301 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 SLC52A3Q9NQ40 469 aa9.72□□□□□ -0.85
CCDC47-203ENST00000580986 C5AR2Q9P296 337 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms