RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 UFL1O94874 794 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 BMP10O95393 424 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 WDPCPO95876 746 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 MBD3O95983 291 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 EPOP01588 193 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 KRT14P02533 472 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 H1F0P07305 194 aaKnown RBP2.87□□□□□ -1.95
KPNB1-208ENST00000580019 IVLP07476 585 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 TROVE2P10155 538 aaKnown RBP eCLIP2.87□□□□□ -1.95
KPNB1-208ENST00000580019 ANPEPP15144 967 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 GCFC2P16383 781 aaKnown RBP2.87□□□□□ -1.95
KPNB1-208ENST00000580019 CKMT2P17540 419 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 AMD1P17707 334 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 HNF1AP20823 631 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 PSMA2P25787 234 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 CD1BP29016 333 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 SFTPDP35247 375 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 TRIM23P36406 574 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 CHRNA7P36544 502 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 MNDAP41218 407 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 GRIA1P42261 906 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 PPP3CCP48454 512 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 TNFSF10P50591 281 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 GEMP55040 296 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 CLDN20P56880 219 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 NLRP11P59045 1033 aaKnown RBP2.87□□□□□ -1.95
KPNB1-208ENST00000580019 PDE1BQ01064 536 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 BNC1Q01954 994 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 CDH18Q13634 790 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 CTF1Q16619 201 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 CA9Q16790 459 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 PHKG1Q16816 387 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 PCK2Q16822 640 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 KLHL40Q2TBA0 621 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 UGT3A2Q3SY77 523 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 SLC9C1Q4G0N8 1177 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 GPAT3Q53EU6 434 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 ELFN2Q5R3F8 820 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 CCDC122Q5T0U0 273 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 GRTP1Q5TC63 336 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 ATF7IP2Q5U623 682 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 TTC23Q5W5X9 447 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 TMEM71Q6P5X7 295 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 LINGO4Q6UY18 593 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 Q6ZPB1 254 aaPredicted RBP2.87□□□□□ -1.95
KPNB1-208ENST00000580019 FAM57BQ71RH2 274 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 TRPM8Q7Z2W7 1104 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 PRUNE1Q86TP1 453 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 SPATA24Q86W54 205 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 PAQR7Q86WK9 346 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 WDR49Q8IV35 697 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 MAP7D3Q8IWC1 876 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 ZNF683Q8IZ20 524 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 LGI2Q8N0V4 545 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 SLC43A2Q8N370 569 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 COMMD1Q8N668 190 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 ANKFN1Q8N957 763 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 RNF149Q8NC42 400 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 TRPV3Q8NET8 790 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 BPIFCQ8NFQ6 507 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 RNF128Q8TEB7 428 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.87□□□□□ -1.95
KPNB1-208ENST00000580019 DAZLQ92904 295 aaKnown RBP2.87□□□□□ -1.95
KPNB1-208ENST00000580019 ISG20Q96AZ6 181 aaKnown RBP2.87□□□□□ -1.95
KPNB1-208ENST00000580019 ANKRD27Q96NW4 1050 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 NPAS2Q99743 824 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 C11orf70Q9BRQ4 267 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 WRAP53Q9BUR4 548 aaKnown RBP2.87□□□□□ -1.95
KPNB1-208ENST00000580019 RIMS4Q9H426 269 aaPredicted RBP2.87□□□□□ -1.95
KPNB1-208ENST00000580019 KLHL31Q9H511 634 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 Q9H8V8 135 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 RNF121Q9H920 327 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 SGK2Q9HBY8 427 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 ACKR4Q9NPB9 350 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 NOX4Q9NPH5 578 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 LZTFL1Q9NQ48 299 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 KLHL28Q9NXS3 571 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 HACD3Q9P035 362 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 ERVK-18Q9QC07 812 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 EPHA6Q9UF33 1036 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 SLC12A6Q9UHW9 1150 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 PSORS1C1Q9UIG5 152 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 FZD10Q9ULW2 581 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 TMED7Q9Y3B3 224 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 TMED3Q9Y3Q3 217 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 SRPRBQ9Y5M8 271 aaKnown RBP2.87□□□□□ -1.95
KPNB1-208ENST00000580019 SPIN1Q9Y657 262 aaPredicted RBP2.87□□□□□ -1.95
KPNB1-208ENST00000580019 MAP3K19Q56UN5 1328 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 RNF123Q5XPI4 1314 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 PCDH11YQ9BZA8 1340 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 METP08581 1390 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 OVOS2A0A0G2JMS6 1433 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 OVOS2A0A0J9YW53 1432 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 CCDC144AA2RUR9 1427 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 TNS3Q68CZ2 1445 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 OVOS2Q6IE36 1432 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 TAF1P21675 1872 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 TOPAZ1Q8N9V7 1692 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 ABCA3Q99758 1704 aa2.86□□□□□ -1.95
KPNB1-208ENST00000580019 A0A087WUV0 522 aaPredicted RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms