RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CD22P20273 847 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 GSTM2P28161 218 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 KCNC1P48547 511 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 HNMTP50135 292 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 HERVK_113P63132 956 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 ERVK-8P63133 956 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 IGLV3-21P80748 117 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 SRYQ05066 204 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 FAM27E3Q08E93 113 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 DOC2AQ14183 400 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 ZNF267Q14586 743 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 TSNQ15631 228 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 ACKR1Q16570 336 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 MSS51Q4VC12 460 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 NHSL2Q5HYW2 709 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 SPANXN3Q5MJ09 141 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 HP1BP3Q5SSJ5 553 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 FAM45BPQ6NSW5 357 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 SLC29A4Q7RTT9 530 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 YRDCQ86U90 279 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 PPP1R14CQ8TAE6 165 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 FAM45AQ8TCE6 357 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 ZPLD1Q8TCW7 415 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 ANKRD49Q8WVL7 239 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 MAGOHBQ96A72 148 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 INTS12Q96CB8 462 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 CERS2Q96G23 380 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 ZNF597Q96LX8 424 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 RILPQ96NA2 401 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 WFIKKN1Q96NZ8 548 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 KCNC2Q96PR1 638 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 CCL19Q99731 98 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 TBCDQ9BTW9 1192 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 ERVK-6Q9BXR3 956 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 WWTR1Q9GZV5 400 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 UBTD1Q9HAC8 227 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 PLAC1Q9HBJ0 212 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 NDRG3Q9UGV2 375 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 ERVK-19Q9WJR5 959 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 OARD1Q9Y530 152 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 WIF1Q9Y5W5 379 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 C2orf72A6NCS6 295 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 A8MXE2 369 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 DEFB108AA8MXU0 73 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 GNB5O14775 395 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 CLGNO14967 610 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 RCBTB2O95199 551 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 TGFB1P01137 390 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 CLPSP04118 112 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 NID1P14543 1247 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 ZNF37AP17032 561 aaPredicted RBP9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 HIST1H1TP22492 207 aaPredicted RBP9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 HPDP32754 393 aaPredicted RBP9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 CASP3P42574 277 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 RPL21P46778 160 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 MASP1P48740 699 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 SLC37A1P57057 533 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 CDKL1Q00532 357 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 TGM3Q08188 693 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 SLAMF1Q13291 335 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 RCAN2Q14206 197 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 EBPQ15125 230 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 AP5B1Q2VPB7 878 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 TBCELQ5QJ74 424 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 C18orf63Q68DL7 685 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 TRMT10BQ6PF06 316 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 RNF111Q6ZNA4 994 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 PACS2Q86VP3 889 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 DND1Q8IYX4 353 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 SPATA6LQ8N4H0 392 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 NKAPQ8N5F7 415 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 BBOF1Q8ND07 529 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 SPPL2AQ8TCT8 520 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 UCN3Q969E3 161 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 PIK3IP1Q96FE7 263 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 FBXL20Q96IG2 436 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 MS4A14Q96JA4 679 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 TUBA1CQ9BQE3 449 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 TMEM79Q9BSE2 394 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 CAPS2Q9BXY5 557 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 ANGPTL4Q9BY76 406 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 RPF2Q9H7B2 306 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 PRM3Q9NNZ6 103 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 TEX10Q9NXF1 929 aaPredicted RBP9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 KLHL28Q9NXS3 571 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 CTNNAL1Q9UBT7 734 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 C15orf41Q9Y2V0 281 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 IKBKGQ9Y6K9 419 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 SPACA6W5XKT8 324 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 DSCAMO60469 2012 aa9.22□□□□□ -0.93
NPLOC4-220ENST00000576940 C2orf92A0A1B0GVN3 265 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 RNF212BA8MTL3 300 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 TP53I11O14683 189 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 SNPHO15079 494 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 CTIFO43310 598 aaKnown RBP9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 DYRK3O43781 588 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 SNX4O95219 450 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 TTC4O95801 387 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 CYP4B1P13584 511 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 ALOX15P16050 662 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms